Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1005 |
Symbol | |
ID | 5538471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1315364 |
End bp | 1316233 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640893148 |
Product | nicotinate-nucleotide pyrophosphorylase |
Protein accession | YP_001431131 |
Protein GI | 156741002 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.257167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTAA ACTCTTCACT CCACCCGGAT ATTCTCGACG CCATCCGCCG CGCACTCACA GAGGACGTCG GACCGGGGGA TGTCACCACC AACAGCATCG TGCCGCCGGA TGCGGCGATG CGCGGACGGA TCATCGCCAA ACAGGACGGC GTGGTGGCCG GGCTTGATGT GGCGCAGGCG GTGTATCGCG CCGTCGATGA GCGGATCGTC TTCACGGCGC TGGTCGCGGA AGGCGAGCGC GTCACTAATC GACAGCCCCT CGCGCTTGTT AGCGGTCCGG CGCGCGGGTT GCTCACCGCA GAGCGCGCGG CGCTCAATTT TCTGGGGCGA ATGTCGGGTA TTGCCACGCT AACCCGCCGG TTTGTGGACG CCGTCGCCGG GACAGGCGCG ACCATTCTCG ATACGCGCAA AACCGCCCCC GGATTGCGCA TGGTCGATAA ACTCGCTGTT CGGCGCGGCG GCGGGCGCAA CCATCGCATC GGGTTGTACG ACATGGTGTT GATCAAGGAC AACCATATCG ACTTTGCCGG TTCGCTGCGC GCTGCGGTCG AACGCGCCCG CGCACACGCG CCGCACCTGG AGATTGAGGT CGAGGCGCGC ACCCTCGATG ACGTGCGTGA GGCGCTCGAT CTTGGGGTGC AGCGCATCAT GCTCGATAAC ATGCCCCCCG CGATGATGGC GGAAGCGGTG CGCCTGGTCG CCGGTCGCGC TCGCCTCGAA GCGTCGGGGA ATGTGTCGCT CGACAATGTC CGACAGATTG CCGAAACCGG GGTGGACGAC ATTTCCATCG GCGCTCTGAC CCACTCGGCG CGCGTTTTTG ATGTCAGTTT CGATTATCTT GCTTCGGAAG AAGCCACAGG GAGACCATGA
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Protein sequence | MTLNSSLHPD ILDAIRRALT EDVGPGDVTT NSIVPPDAAM RGRIIAKQDG VVAGLDVAQA VYRAVDERIV FTALVAEGER VTNRQPLALV SGPARGLLTA ERAALNFLGR MSGIATLTRR FVDAVAGTGA TILDTRKTAP GLRMVDKLAV RRGGGRNHRI GLYDMVLIKD NHIDFAGSLR AAVERARAHA PHLEIEVEAR TLDDVREALD LGVQRIMLDN MPPAMMAEAV RLVAGRARLE ASGNVSLDNV RQIAETGVDD ISIGALTHSA RVFDVSFDYL ASEEATGRP
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