| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0994 |
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| Symbol | |
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| ID | 5538460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1296347 |
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| End bp | 1298707 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640893137 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_001431120 |
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| Protein GI | 156740991 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0985601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAAA TGATTGAGAC TTCCGATCAC GACCTCCCAC TCGCTATTCT GGGAGAACTG
GTGATCATGC CGCACATGAC GGTGCCGCTG CAGGTGGGGC AGGGGAAGTC GTATCGCGCC
ATGGAGCAGG CATGGGAGAA TGATCATCTT GTTTTGTTGA TTTTTGTATC TGAAAGCGAA
ATCGAGACGT ACAAAAGCAG CCAACCGCAG CAGTTGCCGC CCGTTGGCGT GATTGCGCGT
CTTGACGAAT TCGTCAAACT GCCCGACGGA ACGGCACGCA TCATTCTGGA GGGCATCAGT
CGCGCATTGG TGCAGACGAT GCTCCAGAGT GAGCCGTTCT ATCGGGTGCG CTGCCACGCG
ATCAGCGATC CCGAACCCAG GGGCATTGAA ATTGAAGCCC TGATGGATTC GGTCAAGCAA
CAGATTGATG AGTTCGTCGA TCACCTCGGT GAAGTGCCGC AGGATGCGGT TGCCTTTGTC
CACCGCATCG ACAAACCAGG GCACCTGGCA GACATTGTGA CATGGGCGCC GGCCTTTGAG
TTCGAGGAAC GGCTCGATAT TCTTAACGAA CTCGATCCGG TCGAGCGGTT GCGCCGCGCG
CATCGCCTGC TTGCCCGGCA ACTCGAATTG CTCAAACTGC GCCAGAAGAT TCAGCAGGAT
ACGAAAGAAG TGCTGGACCA GAGCCAGCGC GAGTACTTCC TGCGCGAACA AATGCGAGTC
ATTCGTCGTG AACTGGGTGA AGACGATGAT GTTGATGATC CCATCGATGA GTTGAAGCGC
AAAATTGCCC AACTCGACGC TCCAGACTAT GTCAAAGAGC AGGCGATGCA CGAACTCAAG
CGTCTGGCGC AGCAGGGCAT GAATAGCCCG GAAGCGGGCG TGATCCGCAC CTATCTCGAT
TGGATCCTGA ACCTGCCCTG GGCGGAAGAG GAATTGCCTG AGATTAGCCT GCACGAGGCG
CAGAAGGTGC TCGACGAGGA TCACTACGGT CTTGAGCGGG TCAAGGAGCG TATTCTGGAG
TACCTGGCGG TGCGTAAACT GGCGGGGAAT CGGATGCGTT CGCCTATTCT GTGCTTCGTT
GGTCCGCCCG GCGTCGGTAA GACTTCGCTT GGGCGCTCAA TCGCGCGGGC GCTGGGGCGC
AAGTTCGTGC GCACCAGCCT TGGCGGCATT CGCGATGAAG CCGAAATTCG CGGGCACCGT
CGTACGTACA TCGGCGCGTT GCCGGGACGG ATCATCCAGG GCATGAAAAC GGCGAAGTCG
CGCTATCCGG TGTATGTGCT CGATGAGATC GATAAGGTCG GCCAGGATTT CCGCGGCGAT
CCGACCTCGG CGCTGCTGGA AGTGCTCGAC CCTGAGCAGA ATAATGCGTT CTCCGATCAT
TACCTGGAGA TTCCGTTCGA TCTCTCGCAG GTGGTGTTTA TCGCAACTGC CAACCAACTC
GATACGATTC CGAACCCGCT GCGCGACCGC ATGGAAATTA TCGAGATCGG CGGGTATACG
GAAGACGAGA AACTGGGCAT CGCGCAGGGA TTCCTGGTGC GCAAGCAGCG TGAGTTCCAC
GGGTTGGCGC CGGATCAACT GATTATTACC GACGCCGCAA TTATCAAACT GGTGCGTGAA
TATACGCGTG AGGCGGGTGT GCGCAATCTG GAGCGCGAGA TCGCCAGCCT GTGCCGCAAG
ACGGCGCGTA AAGTTGCGGC TGCCAGCGAT GGCGACCCGG TTGAGTTTCC GATTGTCATT
GATGCGCCCG ATATTCCGAA CTACCTGGGA CCAGAACGCT ATACGTTCGG TCTGGCGGAA
GAGAAGGACG AAGTTGGTGT GGCGACCGGC GTCACCTGGT CGCCAACCGG CGGCGACGTG
CTCTCAATCG AGGTGTTGCC GGTGCGTGGC AAGGGTGGGC TTCAACTCAC CGGTCAGTTG
GGCGAAGTGA TGAAAGAGAG CGCTCAGGCG GCAATGAGTT ATGCGCGGTT CCGCGCTGAA
CAGCTTGGCG TCGATCCCAG TTACTTCGAT GAGCACAACA TTCACATCCA CGTGCCCGAA
GGCGCGGTGC CGAAGGACGG TCCTTCGGCG GGTATTACCT TGACGACGGC GCTGATTTCG
GCGGTGACCG GTAAACCGGT GCGACGGGAT GTGGCGATGA CCGGTGAGAT TACGCTGCGC
GGCAAGGTGC TGCCCATTGG CGGCTTGAAA GAGAAGACGC TGGCGGCGCA TCGTGCAGGT
ATTCGCACGT TCATCCTGCC GAAGGATAAT GCGAAAGATA TTGCGGAATT GCCAAAGAAA
GTGCGCGAGG AGTTGCAGTT GATCCCGGTC TCGTCGATGG ATGAAGTGCT GAAGATCGCA
CTGGCGCACC AGGGGTCGTG A
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| Protein sequence | MGKMIETSDH DLPLAILGEL VIMPHMTVPL QVGQGKSYRA MEQAWENDHL VLLIFVSESE
IETYKSSQPQ QLPPVGVIAR LDEFVKLPDG TARIILEGIS RALVQTMLQS EPFYRVRCHA
ISDPEPRGIE IEALMDSVKQ QIDEFVDHLG EVPQDAVAFV HRIDKPGHLA DIVTWAPAFE
FEERLDILNE LDPVERLRRA HRLLARQLEL LKLRQKIQQD TKEVLDQSQR EYFLREQMRV
IRRELGEDDD VDDPIDELKR KIAQLDAPDY VKEQAMHELK RLAQQGMNSP EAGVIRTYLD
WILNLPWAEE ELPEISLHEA QKVLDEDHYG LERVKERILE YLAVRKLAGN RMRSPILCFV
GPPGVGKTSL GRSIARALGR KFVRTSLGGI RDEAEIRGHR RTYIGALPGR IIQGMKTAKS
RYPVYVLDEI DKVGQDFRGD PTSALLEVLD PEQNNAFSDH YLEIPFDLSQ VVFIATANQL
DTIPNPLRDR MEIIEIGGYT EDEKLGIAQG FLVRKQREFH GLAPDQLIIT DAAIIKLVRE
YTREAGVRNL EREIASLCRK TARKVAAASD GDPVEFPIVI DAPDIPNYLG PERYTFGLAE
EKDEVGVATG VTWSPTGGDV LSIEVLPVRG KGGLQLTGQL GEVMKESAQA AMSYARFRAE
QLGVDPSYFD EHNIHIHVPE GAVPKDGPSA GITLTTALIS AVTGKPVRRD VAMTGEITLR
GKVLPIGGLK EKTLAAHRAG IRTFILPKDN AKDIAELPKK VREELQLIPV SSMDEVLKIA
LAHQGS
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