| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0935 |
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| Symbol | |
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| ID | 5538401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1241138 |
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| End bp | 1242037 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893084 |
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| Product | 6-phosphogluconate dehydrogenase-like protein |
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| Protein accession | YP_001431067 |
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| Protein GI | 156740938 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
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| TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating)
[TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.451456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.176552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTG GCATCACTGG TCTTGGACGA ATGGGCGCAA ATATGGCGCG CCGGTGGCTG
CGCGGCGGGC ACCGCGTTGT CGTTCACAAC CGCAGCCGTG GACCGGTTGA CGAACTCGCA
ACTGCCGGGG CTGTTCCGGC ATACACGCTG GACGAATTGG TCGCCGCACT GAAGCCGCCA
CGTGCAGTGT GGGTGATGCT GCCGGCCGGC GAGGTGACCG AACGCGCTAT CGTCGCACTC
GCAAATCTCA TGGCGCCAGG CGACACGATT GTGGATGCTG GCAATACCAT GTACAAAGAC
GATCTGCGAC GCGCAGAAGA ACTCAAAGCG CGCGGCATTT ATTATGTCGA TCAGGGAACG
TCGGGCGGCA TCTGGGGATT AGAACTCGGC TACTGCCTGA TGGTCGGCGG CGACGCTGAT
GTGGTCGCGC GGCTCGAACC GGCATTTCGC ACGCTCGCGC CGCAAGACGG TTATCTTCAC
TGTGGACCGG TCGGCAGCGG TCATTTCGTC AAAATGGTGC ACAACGGCGT CGAGTATGGC
ATGATGCAGG CATACGCCGA GGGATTTGAG ATTATGCGCT CCAAGACCGA GTTCAATCTT
GATCTGCACA AAATTGCCGC TGTCTGGAAT CATGGGAGCG TTGTGCGGTC GTGGTTGCTG
GAACTTGCGG AAGACGCCTT TCGGCAGGAC CCGCACCTCG AAAGCATTCA GGGGTATGTG
GAAGACAGCG GTGAAGGGCG CTGGACGATT CAGACCGCGA TCGAACTCGA TGTTCCCGCA
CCGGTGATCA CGCTATCGCT CTTTGAGCGT TTCCACTCCC GGAAACCGGA GTCGTTCGCC
GCAAAAGTGC TGGCTGCACT CCGCAAAGGC TTTGGCGGTC ACCCCGTCAA GCCAGCGTGA
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| Protein sequence | MDIGITGLGR MGANMARRWL RGGHRVVVHN RSRGPVDELA TAGAVPAYTL DELVAALKPP
RAVWVMLPAG EVTERAIVAL ANLMAPGDTI VDAGNTMYKD DLRRAEELKA RGIYYVDQGT
SGGIWGLELG YCLMVGGDAD VVARLEPAFR TLAPQDGYLH CGPVGSGHFV KMVHNGVEYG
MMQAYAEGFE IMRSKTEFNL DLHKIAAVWN HGSVVRSWLL ELAEDAFRQD PHLESIQGYV
EDSGEGRWTI QTAIELDVPA PVITLSLFER FHSRKPESFA AKVLAALRKG FGGHPVKPA
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