Gene Rcas_0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0876 
Symbol 
ID5538342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1144775 
End bp1145332 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content42% 
IMG OID640893027 
Producthypothetical protein 
Protein accessionYP_001431010 
Protein GI156740881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000013737 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000435247 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
TTGAGTATCT CTGTCGCGAT AGACTTAAGA GTGATTTTAC TATACCGGGG GGGTAGTTTT 
GGAAAAGTCA AAACGGCCTG TTTCGATCTT AAGAGAACGA TAAATTGGGA CCTGAAGGCG
AAAGCGATCA AGTCTGATGA TCACAGATCA ATCCTGAACG ATAAAAAGGC AATAGACAAT
AGTATTGATG AGTATGGCGC CCATGGTTTC ATAGTAGCTC TCTGCGACGT AGAATACGAT
GATGACAATC GTACCTTCCA GAAATGGCAT GAGGAACTCA AAGGAGGAAA ATCGAAATAT
GAGAAGGAAC GCGAAAAACG AACAAGTGTT TCTAGATACC GAAAGACACG AGCAGTATTG
CAAGAGATTC TTTTTCTGCT TGTAACACCC GAGAACCGGC ATAACCTCCA TGAATATCGT
CAGGGGAGAA ATAGTAACGG CAAACCTCGT CCAACAAAGT ATATGCTGGA TTTTGATCAA
GCAGACCATT TTCTGGTTTG CCGTATGCTA TTCTTACCCC ACATAAGTGA TGATTGTGAC
TGTCCGTTGA TCATCTGA
 
Protein sequence
MSISVAIDLR VILLYRGGSF GKVKTACFDL KRTINWDLKA KAIKSDDHRS ILNDKKAIDN 
SIDEYGAHGF IVALCDVEYD DDNRTFQKWH EELKGGKSKY EKEREKRTSV SRYRKTRAVL
QEILFLLVTP ENRHNLHEYR QGRNSNGKPR PTKYMLDFDQ ADHFLVCRML FLPHISDDCD
CPLII