Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0874 |
Symbol | |
ID | 5538340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1143339 |
End bp | 1143767 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640893025 |
Product | hypothetical protein |
Protein accession | YP_001431008 |
Protein GI | 156740879 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00504983 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000040546 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCCTGCCG GGCGTGCCGG GATCATGGTT GGGCGGATGA TGGGTCAACG CCGCTCGCGC GATTCGAATG CCGATGCCGT ATCGTCACCA TTTGGGCGAC CGGCGTATAG GCTCTTCCGC ACTGAGAGGC GGGGAGGAAC TCCATCCGAC CGGAAGAGGC TGGCGTCGAT CACATCGATG GCATTGCAGA CGTTTGAAAA CATATGTGTA TCGCGCGGGA AGGGAGAACG ACCGTCGTTT GAGCGGTTGC GTGGTATGAT GTCGCAGCAA GGGTGCAGAG GTCATCGCGT TGAGCGTCGT GGCGCCATGA CCTGCGAACG AACAATCCGG TCGCTGGATC GCGCGAGGGG GACGCAGCGA ACAGTGCAAA CACATGTTCT TGACACGATA CCGGTCTATG CTATACTGGC ACAGATAACG CCTCGCTAG
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Protein sequence | MPAGRAGIMV GRMMGQRRSR DSNADAVSSP FGRPAYRLFR TERRGGTPSD RKRLASITSM ALQTFENICV SRGKGERPSF ERLRGMMSQQ GCRGHRVERR GAMTCERTIR SLDRARGTQR TVQTHVLDTI PVYAILAQIT PR
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