Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0859 |
Symbol | |
ID | 5538325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1125042 |
End bp | 1125845 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640893010 |
Product | hypothetical protein |
Protein accession | YP_001430993 |
Protein GI | 156740864 |
COG category | [S] Function unknown |
COG ID | [COG1656] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.113509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.015676 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGA TTATGGCGCT GCAACCGGAT CAGGCGCTGA TCCGCGTGTA TGGCGATCTG AACGACTTTC TGCCGCTCCA CGTGCGCGAC ACATGGTTTG TGCGTCCGTG TCGTGGGCGC GAAACGGTCA AGAACCTGAT CGAAACCTGT GGCGTGCCAC ATCCTGAGAT CGGCGCATTA CTCATCGACG GTCGTCCGGT CGATTTCGAT ACATTGGTGC AACCCGGCGT CGCAATCGAA GTCTTCCCGA TAGCGTCGGC GCCGGAGACC CCCATCCCCC TGCGCCCGCC GCTGGACGAT AGACGCTTCG TGCTCGATAC CCACCTGGGG CGACTGGCCG CCTACCTGCG TATGCTCGGC TACGACTGTC TCTACCGGAA CGATGCGCAC GACGCGGAAC TGGCGCGATT GGCACACGAA GAACGGCGCA TTTTGCTGAC CCGCGACCTG GGATTGCTCA AACGCAGCAT CGTGATACAT GGCGCATTCG TGCGCGAAGT TATCCCGTTG CGCCAGATTG TTGAAGTGAT GCGCCGTTTC AACCTGACGC CAGCGCCGAC AGTTTTTCAG CGCTGCATGC GGTGCAACAG CCTGACGACG CCGGTCAGCA AAGCGGAAAT CGATCATCTG CTCGAACCAA AGACCCGTCA GTATTTCGAC ACATTCCGCC GCTGCACGGC GTGCGGCAAG ATCTACTGGC AGGGATCGCA CTACACCCGA ATGCAGGCGC TTCTGGAACG TGCATTGCAG GAGGGCGAAC GGCACGTGGC AAGAAGCGCG AAACGAGAAA GGTTTGAAGG TTGA
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Protein sequence | MKPIMALQPD QALIRVYGDL NDFLPLHVRD TWFVRPCRGR ETVKNLIETC GVPHPEIGAL LIDGRPVDFD TLVQPGVAIE VFPIASAPET PIPLRPPLDD RRFVLDTHLG RLAAYLRMLG YDCLYRNDAH DAELARLAHE ERRILLTRDL GLLKRSIVIH GAFVREVIPL RQIVEVMRRF NLTPAPTVFQ RCMRCNSLTT PVSKAEIDHL LEPKTRQYFD TFRRCTACGK IYWQGSHYTR MQALLERALQ EGERHVARSA KRERFEG
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