Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0857 |
Symbol | |
ID | 5538323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1123552 |
End bp | 1123893 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640893008 |
Product | stage V sporulation protein S |
Protein accession | YP_001430991 |
Protein GI | 156740862 |
COG category | [S] Function unknown |
COG ID | [COG2359] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000382647 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.012678 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGCA ATCTTTCGCA CTCCACACCC GCCACTCGCG CTGTCGGCGC ACATAGCGCC GATGTGGTCG AGCGACAAAG CGCTGAGGTC TTGAAGGTTT CGACACGCTC GCGTCCAAGC GCCGTCGCCG GCGCGATTGC CGGTGTTATT CGCGATAGTG GCGTGGCGGA GGTGCAGTCG ATTGGGGCAG GTGCGACCAA TCAGACGATC AAAGCGGTGG CGATTGCGCG TAGTTATCTC AGTGAAGAAG GTATTGACAT TGTTTGCACT CCTTCGTTCA TTGACGTCGC CATCGATGAT GAAGAGCGCA CAGCGATCCG CCTGCTGGTT GAACGACGAT AG
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Protein sequence | MASNLSHSTP ATRAVGAHSA DVVERQSAEV LKVSTRSRPS AVAGAIAGVI RDSGVAEVQS IGAGATNQTI KAVAIARSYL SEEGIDIVCT PSFIDVAIDD EERTAIRLLV ERR
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