Gene Rcas_0857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0857 
Symbol 
ID5538323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1123552 
End bp1123893 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content58% 
IMG OID640893008 
Productstage V sporulation protein S 
Protein accessionYP_001430991 
Protein GI156740862 
COG category[S] Function unknown 
COG ID[COG2359] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000382647 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.012678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCA ATCTTTCGCA CTCCACACCC GCCACTCGCG CTGTCGGCGC ACATAGCGCC 
GATGTGGTCG AGCGACAAAG CGCTGAGGTC TTGAAGGTTT CGACACGCTC GCGTCCAAGC
GCCGTCGCCG GCGCGATTGC CGGTGTTATT CGCGATAGTG GCGTGGCGGA GGTGCAGTCG
ATTGGGGCAG GTGCGACCAA TCAGACGATC AAAGCGGTGG CGATTGCGCG TAGTTATCTC
AGTGAAGAAG GTATTGACAT TGTTTGCACT CCTTCGTTCA TTGACGTCGC CATCGATGAT
GAAGAGCGCA CAGCGATCCG CCTGCTGGTT GAACGACGAT AG
 
Protein sequence
MASNLSHSTP ATRAVGAHSA DVVERQSAEV LKVSTRSRPS AVAGAIAGVI RDSGVAEVQS 
IGAGATNQTI KAVAIARSYL SEEGIDIVCT PSFIDVAIDD EERTAIRLLV ERR