| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0855 |
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| Symbol | |
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| ID | 5538321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1118031 |
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| End bp | 1121633 |
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| Gene Length | 3603 bp |
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| Protein Length | 1200 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640893006 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_001430989 |
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| Protein GI | 156740860 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00379552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0307887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCTGC GTCGTCTCGA AATCCAGGGG TTCAAAACAT TCGCCGGGCA TACGCTGTTC
GAGTTTCAGC CCGGTGTGAC GGCGGTGGTT GGTCCCAACG GCAGCGGGAA ATCGAACCTC
GTCGATGCCA TCCGCTGGGC GCTCGGCGAG CAGCACCCCG GCACACTCCG CTGCAAACGC
ACCGAAGACC TGATCTTCAG CGGCGGCGGA CGGCGCGCGC CCGCTGGCTT CGCTGAAGTC
TCGCTGACCA TCGATAATCG TGATCGCCTG TTGCCCGCGC CGTACAGCGA AGTGACCATT
ACCCGCCGCG CGACGCGCTC TGGCGAGAAC GAGTATTTCA TCAATCGCCA ACGTGTCCGG
CTGCGCGATG TACAGGAAGT CGCAGCGCCG ATCAGCGGCG CGTATGCGAT CATTAATCAG
GGACTCGTCG ATGCGGCGCT CAATCTGCAC CCCCTGGAGC GCCGTCGTCT CTTCGAGGAC
GCAGCGGCGA TCAGCGTCTA TGAGCAACGC CGCACCGATG CGGAACGGCG CCTGCGCGAG
ACGGGCGCCA ATGTCGCGCG CTGCGCCGAT ATTCTGACCG AACTCGAACC TCGCCTCCGT
TCGCTGAAGC GCCAGGCGGC GCTTGCCCGC TCCCACCGCG ACCTGACCGC CGAATTGCAT
ACGTTGCTCG AGCAATATTA TGCTCATTTG TGGAATATTG CACGGACGGA TTGCGCTGCC
GCCGAACGGT CGGTTCAGGC GCTGGAGTCC ACGCTTGCAG CACGCCAGGC GGAGATCGCC
GCTGCCTCCG CTACGCTCCG GCACACCCGC GATCATATTC ATGCTCTTCG CCACCGCATC
GGCGCGCTGC ACGCCGAAAG CAGCGCCCTC CACACTGATG CTGAGACAGT GCAACGGACG
CTGGCGGTCG GTCAGGAGCG TCTCACCGCG CTGACACGCC AGATCGAGGA TCAGGAACAC
GCATTGCGCG ACCTCGACCA TCAGCGCACT GCACAACAGG CGGATCAGGA AGCCGCTGCC
GCACACCTTG CCGGCGCCGA ACAACGTCTG GCACAGATCC AGCAGGAGTA CAGCGCCCAT
GAGTCGCGTC GCGCCGAACG GCTCGCCAAT CGCGCTCTGT TGCGCCAGAC GCTCGATGAA
GCGCACCACA CGCTGATGGA GATCCGCGCA GCGCTTGGAG TGGTGCAACG TCAGATGGTG
CAGATTGCCG ATCAATACGA ACACCTGATC CGTGAACGCG CCGTCGCCGA AGAGTCCCTG
GCTGCCGCTC AGGAGACGCT GGCCGCTCGC CGCCACGAAA GCGCGCAGGC TGAGGCGCAG
GTCGCGGCGC TGGAGCGCGA GCTGGCTGAT GCCGCTCTCC GCGCCGAACA GGCACGCGGT
GATGTCGAAC ACCGTCGCCG CCAGCGCGCC GCCGCCGCCG AGACGCTCGA AGCAGCGCGG
CGGCGGCAGA TGGACCTGGA AGCGCGTCTG GAAACGCTGC GACGGCTCCA TCACAGTTAC
GCCGGAACGT TCGCCGGCGT GCGTGCAGCG ATGCAGTGGG CGGAAGCGCA GCGGCGCACT
GGCTTTGCGC TCGTCGCAAC CCTGCTGCGC GTTCCGGCGG AACTTGAGAC CGCAATCGAA
GTGGCGCTTG GTTCGCGCCT TCAGAACATC GTCGTCGATC ATTGGGAAGA TGCCGAGGCA
GCCATCGAAG CCCTCAAACG GAGCGGCGAA GGGCGCGCAA CATTCCTCCC GCTCGATACC
ATCCGTGCGC GTGGCAGCAA TGGCGGACGG GCATATGGGA CGGTAGACCC GGACGACGGC
GTGCTCGGCG TCGCCGCCAA CCTGATCGAC GTGGATGAGC GTTACCGTCC GATCGCCGAT
ATGCTCCTCG GTCGTACCCT GGTGGTTCGC TCGCTGGCGG TTGCCCGGCG TGAACTCTCG
CGTATCGGCG GCGGGTGGAC GATGGTCACC CTGGCAGGAG AGCAGGTCAG CGCCGCTGGC
GCCGTCACCG GCGGCGCAGC GGTGAAGGAG AGCGGAACAC TGCGGCGCGA ACGCGAACTC
CGCGAACTTC CCGAACGCCT GGAAGCGGCG ACGCGCGCCG TCGAACAGGC GCACGCGCAC
TACGTGGTCG CCAGCGAAGC ATATGCCGCC GCTGAACAGA TGGCGCGCGA GGCGGAACGT
CAGCAGCGCC AGGTGCAGCG CAACCTCGAC CAGGAACGCG CCGCTGCTGC ACAGGCGCAG
CGCGCTGTTG ACCGTGCCGA TGCGGAACGC CTCATCCGGC AACGGCGCAT TGAGCAGATC
GACGCAGAAA TGACCGCACT GCTCGATCGC CGCAGATCGG TTATCGCCGA ACATGAAGAC
TTAACGCAGC GTGAAGCCGC GGCGCGCGCG CAGGTCGATC AGTTGCAGGC GCAGGAAGCA
GCACAACGCG CCGAAGACGC CGCCGACGAC GAGGCGCTGG CAGTCCTGCG CGCGCGCCGC
GCCGATGCCG AGGGCGAGGT GCGCGCCCTG CGCGCCGTTT TGCACACCGG CGCACAGGCG
CTGGCGCGCA GCAACGATCA GCGTCGGGCG CTGGAAGAAC GTATCGAGCG CCTGTATCAT
GAACGTGAAA CACTGACGCA TGAACTGACT CACAGCGCTG CCCGCCATCA GGCGCTTCTG
GAACAGATCG ACGCGCTCCG CGCCCGCATC GATCCCGCCG AAGCGGAGTT GACCGTTCTG
GAACAGCAGC GTGAGGAGCA CGAGACGCGC ACCCAGAACC TGACCGGCGC CCTGATCGAC
GCAGAGTCGG CATATAACCG GGCGACCATC GACGCGCAGC GCGCGCGGGA TCGCCTGGAA
ACCCTGCGGG AGCGCGCCGC CGGCGACGGC ATCGACATTG AAGCCGCTGC GCGCTCCCAT
CCCGAACCGC TGCCGGACGG CAACCCGGAC ACGCTGCATC AGCGCATCAT CGAACTGAAA
CAGCGCATTG CACGGCTGGG AGTCATCAAC CCGCTGGCGC TCGAAGAGTA CGACGAAGCC
GCTGCGCGCT ACGAGTTCCT GAGCAGTCAG ATGCACGACC TGCGCGCTGC TTCGGCAACG
CTCAACGAGT TGATTGCCGA ACTGGACACC GCCATCCGCA CTCGCTTCGA AACGACGTTC
CGCATTGTCG CTGCCGAGTT CGAGCGCAGT TTCACCCGAC TATTCGGCGG TGGCGAGGCG
CGCCTGGTGT TGATCAACGA CAATGGCGGC GACGACGATG ATCAGAATGA CGCCAGACCG
CCAGGCATCG CATCGCTTGG CGTTGATATC ATCGCTCGCC CACCGGGGAA ACGGCAACAA
CACCTGGCGC TGCTGTCGGG CGGAGAACGG GCATTGACCG CTGCCGCGCT GCTCTTCGCC
ATTCTCAGGG CGAACCCAAC GCCGTTCTGC GTCCTCGATG AGGTCGATGC CGCGCTCGAT
GAGGCAAATA TCGGGCGCTT CCGCGATGCG CTCACCGAAC TGAGTGAAAA GACGCAGTTC
ATCGTCGTCA CGCACAATCG CGGCACCATT GAGGCGGCTG ACACGATCTA CGGCATTACT
ATGGGCGACG ATGGCGCATC CCGCGTGCTC TCGCTCCGGC TCGAGGAGAT CGACCGTCCG
TAG
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| Protein sequence | MYLRRLEIQG FKTFAGHTLF EFQPGVTAVV GPNGSGKSNL VDAIRWALGE QHPGTLRCKR
TEDLIFSGGG RRAPAGFAEV SLTIDNRDRL LPAPYSEVTI TRRATRSGEN EYFINRQRVR
LRDVQEVAAP ISGAYAIINQ GLVDAALNLH PLERRRLFED AAAISVYEQR RTDAERRLRE
TGANVARCAD ILTELEPRLR SLKRQAALAR SHRDLTAELH TLLEQYYAHL WNIARTDCAA
AERSVQALES TLAARQAEIA AASATLRHTR DHIHALRHRI GALHAESSAL HTDAETVQRT
LAVGQERLTA LTRQIEDQEH ALRDLDHQRT AQQADQEAAA AHLAGAEQRL AQIQQEYSAH
ESRRAERLAN RALLRQTLDE AHHTLMEIRA ALGVVQRQMV QIADQYEHLI RERAVAEESL
AAAQETLAAR RHESAQAEAQ VAALERELAD AALRAEQARG DVEHRRRQRA AAAETLEAAR
RRQMDLEARL ETLRRLHHSY AGTFAGVRAA MQWAEAQRRT GFALVATLLR VPAELETAIE
VALGSRLQNI VVDHWEDAEA AIEALKRSGE GRATFLPLDT IRARGSNGGR AYGTVDPDDG
VLGVAANLID VDERYRPIAD MLLGRTLVVR SLAVARRELS RIGGGWTMVT LAGEQVSAAG
AVTGGAAVKE SGTLRREREL RELPERLEAA TRAVEQAHAH YVVASEAYAA AEQMAREAER
QQRQVQRNLD QERAAAAQAQ RAVDRADAER LIRQRRIEQI DAEMTALLDR RRSVIAEHED
LTQREAAARA QVDQLQAQEA AQRAEDAADD EALAVLRARR ADAEGEVRAL RAVLHTGAQA
LARSNDQRRA LEERIERLYH ERETLTHELT HSAARHQALL EQIDALRARI DPAEAELTVL
EQQREEHETR TQNLTGALID AESAYNRATI DAQRARDRLE TLRERAAGDG IDIEAAARSH
PEPLPDGNPD TLHQRIIELK QRIARLGVIN PLALEEYDEA AARYEFLSSQ MHDLRAASAT
LNELIAELDT AIRTRFETTF RIVAAEFERS FTRLFGGGEA RLVLINDNGG DDDDQNDARP
PGIASLGVDI IARPPGKRQQ HLALLSGGER ALTAAALLFA ILRANPTPFC VLDEVDAALD
EANIGRFRDA LTELSEKTQF IVVTHNRGTI EAADTIYGIT MGDDGASRVL SLRLEEIDRP
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