| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0853 |
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| Symbol | |
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| ID | 5538319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1115948 |
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| End bp | 1116613 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893004 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001430987 |
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| Protein GI | 156740858 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0114666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCTT TTACTGCCGC TATCTTCGAC ATGGATGGCA CCCTGCTCAA CAATATGCCG
CTCTACTACG CAGCGTTTCG GATATTCATC GAGCGACACG GCCTGCGCCC GCCGCCGCCG
TTCGAAGCCA TCCGACTGAT CGGCATGCGG CAGAGCGATA TTTTTCCGGC GCTCTTTGGG
CGCACATTGA CGCCGGAAGA GATAGCGCAC TACAGCGCCG AAGCCGGAAC GATCTACCGT
GAGATGCTGG CAGGCGTTAC GCCACTGCCA GGGCTGCTGC GCTTCCTCGA TCTGCTCGAG
CAACGGCAGG TGCGCATCGC GCTGGCCACA TCCGCTCCCA GAGACAATGT TGCTCCAACA
CTCGAGGCGC TGGGCATCGC CGACCGGTTT GCCGCCATCA CGCTTGGCGA AGAAGTGCCG
CGCGGCAAGC CCGCGCCCGA CATCTTCCTC GAAGCGGCGC AGCGCATCGA GCGCCCAGCC
GAATGCTGCG TGGTCTTTGA GGACTCGTTC GCCGGCATTG CCGCAGCGCG CGCCGCCGGG
ATGCGCTGCA TTGCGCTGGC AACTACCCAC TCCGCCGACG ACCTGCGCGC TGCCGATCCC
GACCTGATCG TCGCCGATTA CGACGAATTG CTCCGCATGA CTCCTCTGCT GTTTCCCTCG
CTCTGA
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| Protein sequence | MQPFTAAIFD MDGTLLNNMP LYYAAFRIFI ERHGLRPPPP FEAIRLIGMR QSDIFPALFG
RTLTPEEIAH YSAEAGTIYR EMLAGVTPLP GLLRFLDLLE QRQVRIALAT SAPRDNVAPT
LEALGIADRF AAITLGEEVP RGKPAPDIFL EAAQRIERPA ECCVVFEDSF AGIAAARAAG
MRCIALATTH SADDLRAADP DLIVADYDEL LRMTPLLFPS L
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