| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0834 |
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| Symbol | |
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| ID | 5538300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1094818 |
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| End bp | 1095498 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640892986 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001430969 |
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| Protein GI | 156740840 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.6033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000040546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTATATCC TGGTTGCCGA TGATGATCTG CCCAATGTCA AACTGACTGC ATTTCTCCTT
GAAGAGGCAG GCTACAAAGT CATTAAAGCC TACGATGGTC CCTCCATCCT GCAATCGGTC
GAACAGTACA ACCCGGATCT CATTCTGCTC GATGTCATGA TGCCGAAGAC GAATGGTTTC
GATGTGTGCC GGCAGATTCG GCGCACGTCG GATGTCCCGA TCATTTTCCT CTCCGCTCGT
TCGCAGTTAC AGGATCGGGT GACAGGCTTG CAGATTGGCG GCGATGATTA TCTGGTCAAA
CCCTTCGAGC CGTCAGAGTT GCTGGCGCGG GTGGAAGCCG TGCTGCGGCG GCGCAACAGC
GACATGCTTA ACCCCTCGGC GCGCCTGAGC CATGGAGACA TTACGCTCGA CCCGGTCGAG
CACAAGGTGC TGTTCGCCGA TGGCCGGATC GTCGAACTGA CGCCGCTGGA GTTTCGCCTG
CTCTACTATT TGATGAAGAA CTCCGGGCGA GTACTGAATA CCAGCCAGAT TCTGAATAAA
GTCTGGGGGT ACGACTGCGA AGGCGAAAGC AATCTGGTAG CCGTCTACAT TCGTCGCCTG
CGCACCAAGA TTGAGCGCGA CCCTGAACAC CCGCGTCATG TGTTGACGGT GCGTAATCTG
GGGTACAAAT TCGAAGCATA A
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| Protein sequence | MYILVADDDL PNVKLTAFLL EEAGYKVIKA YDGPSILQSV EQYNPDLILL DVMMPKTNGF
DVCRQIRRTS DVPIIFLSAR SQLQDRVTGL QIGGDDYLVK PFEPSELLAR VEAVLRRRNS
DMLNPSARLS HGDITLDPVE HKVLFADGRI VELTPLEFRL LYYLMKNSGR VLNTSQILNK
VWGYDCEGES NLVAVYIRRL RTKIERDPEH PRHVLTVRNL GYKFEA
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