Gene Rcas_0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0827 
Symbol 
ID5538293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1085707 
End bp1086393 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content58% 
IMG OID640892979 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001430962 
Protein GI156740833 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0585865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000612454 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGGCGTC GGCGACCTTT CTTGTGCAAG ATCGTGCCTG AGGACAGACA TTTCATGGAA 
CCGGACTTTG AAGGTGCGCG AGCATATGCG CTTGCCCGGC TCGCTACGGA ATTGCCGGAA
ACCATCACGT ACCATTCGAT TCAGCACACC CGCGACGATG TGGCGCCGGC AGCCGAGCGG
TTAGCGCATG CCGAAGGGGT CAACGGTGAA GACTTGTTGC TGCTGCGCAC TGCGGCGTAT
TTTCATGATC TGGGGTTTGT CGTGCGTCGT GAGGAGCACG AACAGGCGGG TGCAGAAATA
GCTGCGCAGG TGTTACCTGC GTTTGGCTAC ACACCCGTCC AGATCGAAAA AATTTGCCGC
ATGATTATGG CAACCCGCAT CCCTCAATCA CCGGCCACAT TGCCAGAGCA GATTCTGGCG
GATGCCGATC TCGACACGCT GGGCAGTGAA CATTTCTGGC AACACAGTGA GAAACTGCGT
GCTGAGAATG AAGCGTTCGA CGGACCGATG AGCGATGTTC AGTGGTACAC CACCCAGGTG
ACGTTCATCG AGAACCACCG CTACTGGACG GCAACGGCGC GCGCGTTGCG CGAACCGCGC
AAGCAAGAGC ATCTGCGGCA GTTGCGCAAA CTCCTCGACC ATGCGCGGCG TCGAGCGTCT
GATGCGCCAA AATCGTGCCT TTCCTGA
 
Protein sequence
MRRRRPFLCK IVPEDRHFME PDFEGARAYA LARLATELPE TITYHSIQHT RDDVAPAAER 
LAHAEGVNGE DLLLLRTAAY FHDLGFVVRR EEHEQAGAEI AAQVLPAFGY TPVQIEKICR
MIMATRIPQS PATLPEQILA DADLDTLGSE HFWQHSEKLR AENEAFDGPM SDVQWYTTQV
TFIENHRYWT ATARALREPR KQEHLRQLRK LLDHARRRAS DAPKSCLS