Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0806 |
Symbol | |
ID | 5538272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1057818 |
End bp | 1058657 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640892958 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001430941 |
Protein GI | 156740812 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0845651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGA TTCATATCGA CAATCGATTG GTACACTATG AGGTTGTCGG TCGCCGTGGC GCGCCGGTGA TCTTTCTGCA CAGCTGGCTT GGTTCATGGC GCTACTGGTT GCCGACGATG GAACACGCCT CCGAACGGTA TCGCACCTTC GCTATCGATT TTTGGGGGTT TGGCGAGTCG GATCGACGCG ATGGCGCGTT TTCAATTGCT GAGTACGTCG ATCTGGTCAT CTGCTTTATG AACCAGCTCG GTATTGCCAG AGCCAGTCTT GTAGGGCATG GCCTTGGTGG AATGGTTGCG CTCCGCACCG CAAGTCAGTA TCCAGACCGG GTGTCGCGCC TCATGATCGT CAGTGCTCCA ATTCAGGGAT CGCAGATCCA GAACTACGTT CGACCTGGCG CGCTGTCGCG TCTCTTCGGT CGCACCGCTC CCAGCAACAT CTGGACGCGC CTGATGCGTC AACTCAATGT CGATTATCCG CAAATTCTGA ATGAAATTAT CGAAGATACC GACAGCCTCT CCGAAACGGT GGTGCAGCGC GTGATCGAGT CGGTCGTTGC GACCGATCTG CGTGAGGACC TCGAACGCCT CGAAACGCCG TTGCTGGCGG TTTTTGGCGA AAAAGACGCC ATTGTGTCGT CTGATCAGGC GCGCTTCCTG CACGATGACC ACGCCTCGAT GCAACAGGTG ATCAAACTGC CGCGTTCGAA TCACTTCCCC TTCCTTGACC AACCGAATGT CTTCAACCGT CTGCTGATGG ATTTTCAGGC GAGCAATGGC ACGCAAGTGG AGATCAAGAC CGAATGGCGA CGGCGGGTGA GTCAGTTGGA GTATATCTGA
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Protein sequence | MSAIHIDNRL VHYEVVGRRG APVIFLHSWL GSWRYWLPTM EHASERYRTF AIDFWGFGES DRRDGAFSIA EYVDLVICFM NQLGIARASL VGHGLGGMVA LRTASQYPDR VSRLMIVSAP IQGSQIQNYV RPGALSRLFG RTAPSNIWTR LMRQLNVDYP QILNEIIEDT DSLSETVVQR VIESVVATDL REDLERLETP LLAVFGEKDA IVSSDQARFL HDDHASMQQV IKLPRSNHFP FLDQPNVFNR LLMDFQASNG TQVEIKTEWR RRVSQLEYI
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