| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0804 |
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| Symbol | |
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| ID | 5538270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1050338 |
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| End bp | 1051282 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640892956 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001430939 |
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| Protein GI | 156740810 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.504991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAAAG AGAAGATCCT GGTCGTCGAA GACGCCCCCG ACATTTCCAG TCTGCTCAAG
ATTTATTTTA CGTCGCAGGG GTATGACGTC CTGACCGCAA TGCGCGGTCA GACTGCCCTC
GAAATTTGCC GGAAGACGCC GCCCAACCTG GCGCTGCTCG ATGTCAATCT TCCCGATATG
GAAGGGTACG AGATTGGGAA GGCGCTACGC CAGAGTGCGC GAACGCGCCA TATTCCGATC
ATCTTCCTGA CGGCGCGCGG CGAAAAGCAG GATCGCCTGA AGGGACTCGG CGAGGTCCAG
GCGGAGTATT ACATCGTGAA GCCCTTTGAT ATCGAAGAAG TGCATACGAT TGTCAAAGGC
GCCCTTGATC GCGCGCGGCA GAAGAATCTG ACCCATCCGG TCACGAACCT GCCAACCGCC
GAGTTGATCA ATGAACAATA TCGCACCTTG CTGTCCAGCA GCGGATGGGC GCTGGCGTTG
GTGCATATCA ACGGCTTCGA CGCCTTCACG CAGTCCTATG GCGCTATGGT TGGCGAAGAG
GTGCTGAAGT TTACGGCGCT GTTAATCAGC GAGGCGATCA ACGACTTGGG GCGCCCTGAA
GATTTTGCCG GGCAAATGAT TGTCGGTCCG TCGTTTGTCA TTACCTCGAC GCCTGATGCC
ATCCAGGCGA TCGCTCAGCG CCTGTGCGAC CGGTTCGATG CAGACATTGG GCTGCACTAC
GACTACAAGG ATCGCCGCAA TGGGTATATC ACGATCCAGG GAGAGGATGG CAGTGTGCGG
CAGTTGCCGT TGATGTCGCT CTCGATAGGC ATTCTGACCA GCAACGACGG GCCGTTTTAC
GATATTCGCG AACTGAGCGA AAGTGTTGAA GAAGTTCGGC AGCGCGCCGT CGCCGAGGCG
CGTGAGCAGG GGCGCAAAAG CCATATGAGC GTCGGACGAG CATAG
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| Protein sequence | MSKEKILVVE DAPDISSLLK IYFTSQGYDV LTAMRGQTAL EICRKTPPNL ALLDVNLPDM
EGYEIGKALR QSARTRHIPI IFLTARGEKQ DRLKGLGEVQ AEYYIVKPFD IEEVHTIVKG
ALDRARQKNL THPVTNLPTA ELINEQYRTL LSSSGWALAL VHINGFDAFT QSYGAMVGEE
VLKFTALLIS EAINDLGRPE DFAGQMIVGP SFVITSTPDA IQAIAQRLCD RFDADIGLHY
DYKDRRNGYI TIQGEDGSVR QLPLMSLSIG ILTSNDGPFY DIRELSESVE EVRQRAVAEA
REQGRKSHMS VGRA
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