Gene Rcas_0782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0782 
Symbol 
ID5538248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1023628 
End bp1024056 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content51% 
IMG OID640892934 
ProductS23 ribosomal protein 
Protein accessionYP_001430917 
Protein GI156740788 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.118065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.653003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAACA TTGTGCAATA TCTGATTGAT CACACGATGA GCAACGAAGC AGCAGGAAAG 
TCAATCTCCA GAATTGAGCG TTTTGAAGAT CTGGAGGCAT GGCAGCAAGC ACGAAAACTT
GTGAATACGG TATATAATCT TTCCGATGTT GGCGCGTTTG CACGCGATTT TACGCTGCGT
GACCAGAGGC GTCGCGCTGC GGTATCTATC ATGTCGAACA TCGCCGAAGG CTTCGAGAGC
CGAACTCAGA GCCTCTCCAT TGAGCGCCTG GGAAGAGCCA AAGCCTCATA CGGCGAAGTC
CGTTCACAAC TGTATCTGGC ATATAATCGG CAGTACGTAT CCGGTGAAGT CTTCGAACAG
ACGCTTGCCC AGGCAGAAAG CGCTAGCCGG TTGATCCACG GTTTGATCCG TTATACCAAT
GACCTGTGA
 
Protein sequence
MCNIVQYLID HTMSNEAAGK SISRIERFED LEAWQQARKL VNTVYNLSDV GAFARDFTLR 
DQRRRAAVSI MSNIAEGFES RTQSLSIERL GRAKASYGEV RSQLYLAYNR QYVSGEVFEQ
TLAQAESASR LIHGLIRYTN DL