Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0740 |
Symbol | |
ID | 5538206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 966821 |
End bp | 969319 |
Gene Length | 2499 bp |
Protein Length | 832 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640892896 |
Product | nucleotidyl transferase |
Protein accession | YP_001430879 |
Protein GI | 156740750 |
COG category | [G] Carbohydrate transport and metabolism [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1109] Phosphomannomutase [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.2195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCTG TGGTCATGGC TGGCGGTGAG GGTTCACGTC TGCGCCCTCT CACGATCAAC CGCCCGAAAC CCATGGTGCC CATTGTTGAT CGCCATGTAA TGGCGCACAT TATCGAGTTG CTCAAACGAC ACGGCATCAC CGACATCGTG GTGACGGTTC AGTACCTGGC AAATGTCATC CAGGACCACT TCGGCGACGG ATCGGCATAT GGCGTCCATA TCGAATATTC ACTCGAAGAA CAACCGCTGG GCACAGCCGG CAGCGTCAAG AATGCCGAAC GCTTCCTGCG CGAGCCGTTT CTCGTCATCT CCGGCGACGC GCTCACCGAT TTCGATCTGA CGAAGATCAT CGAGTTTCAT CAAAGCCACG GCGCGACCGC CACGATCACC CTGACCCGCG TTCCCAATCC GCTCGATTAC GGCGTGGTGG TGGTGGATGA ACGCGGCTAT GTGCGTCAGT TCCTCGAAAA ACCGAGCTGG GGCGAGGTCT TTTCCGATAC GGTCAATACC GGCATCTATG TCGTCACCCC TGAAATCTTC CGCTATATCG AAAAAGGCGC GTTCACCGAC TGGTCGAAAG ACGTCTTTCC GCGCATGCTG CGCAGTGGAA ACCTGCCGGT CGGCTATGTC GCCGAAGGGT ACTGGACCGA CATCGGCACG ATTGAAGAAT ACATGCGCGC CAGTCGCGAC TATATGCAGG GGAAGGTCAA CCTGCCGCGT GTCGGTGAAC GCATCTTCGA TGAGGTGTGG GTCGAAGGGG ATGTCGAAAT TGCGCCCGAT GCGCAGTTCC ATGGTCCGGT CTTCCTGGGG CATGGCGTCA AAATCAAGAG CGGCGCCATC ATCCATGGTC CGTCGGCGAT CCGCGACTAT ACCATCATCG ACACCCGCGC AACGATTGAC CGCTCGATCA TCTGGCGCAA CTCGTACATC GGTGAACGCG CCGAACTGCG CGGCGCCATC GTGATGCGGC AGTGCAACAT CAAAAGCCGT GCCGTCCTCT TTGAGGGCAC GGTTGTCGGC GATCAGACGA TCATCAATGC TGGCGCGGTG ATCGGCGCAA ACGTCAAAAT CTGGCCCAGC AAGGAAGTCG AGGAAGGGGC GACGATCAGT TCCAGCATCA TCTGGGGATC GCAGGGGCGC CGTGTGCTCT TTGGGCGTTC GGGGATTTCA GGACTGGTCA ATATCGACCT GACCCCTGAG TTCGGTGCGC GGCTCGGCGC TGCCTTCGGC GCAACGCTGC CGCGCGGCGC CGTGGTGACG ACCAGCCGCG ACACGCACTA TACGCCGCGC ATGATCAAAC GCGGATTGGT CGCCGGGTTG CCCTCGGCTG GCGTGCACGT TGCCGAACTC CACGACGTGC CATTGCCGGT TGCCCGTGTG ATTACCCGCG CAATCAACGC CGCCGGCGGC GTCCATGTGC GCCTGTCACC GCTCGACAGT CGCGTGGTGG ACATCAAATT TTTCGATGCC GACGGACTCG ATATCGATAC CGCCACCGAG CGCAAAATCG AGGGGGTCTT CTTTCGCGAA GATTACCGGC GGGTCTATCT TGACGAAATC GGGCGTATCA ACGAAGTGGA GCATATCAAT CAGATCTACA CCGATATGTT CCTCGGCGCG CTCCGTCCTG ACGCACTTGC CAGCATTGCC CGCAATTTTC AGGTCGTGAT CGACTATGCG AACGCCAATA CGTCGAATTT CCTCCCGGCC ATTCTGCGGC GGTTGCACAT CGAAGCGGTC GAACTGAACG CCAACCTCGA CGCACAGCTT TTGTTTCAGA CGCCGCAACA ATTCGAGGCG GGCATGGAAC GGCTGGCGCG GATTACGCCG GTTCTCGAAG CGTCGCTGGG AGCGCGACTC GACGCAGGGG GGGAGAAAAT CTTCCTGGTT GACGATACCG GGAAACGACT ACCGGGGATG CAGGCGCTCG CAGCCATCAC CGCGCTGGCG CTGGCAGTCA ATGGCGGGGG AACGGTTGCG GTGCCGGTCA CGGCGCCCCG CGCATTCGAG ATGATTGCCG CCAAGTATGG AGGACGAATT GTGCGCACCC GCGCCACCCT TGGCGCGCTC ATGCGCACGG CGGCAGCCAG TCGCGATATG CTTTTGCTAG GGGATGGCGC CGGCAGCGTG ATTTTTCCCT CGTTCTACCC GATTGCCGAT GGCATGTTCG CCATCGTGAA AATTGTCGAA CTGCTGGCGC TTCAACAGGT CCGCCTGTCT GAAATTGTAC GGGATCTGCC GCACTACTTT ATGAGCCAGG CGCGCGTGCC CTGCCGCTGG GAATTCAAGG GCAAAGTGAT GCGCATTCTG AACCAGCAGT ATCAGGACCG TAAGCTCGAT CAGGTCGATG GGGTGAAAAT CGATCTCGGC GACGAATGGG TGCTGATTCT TCCCGATCCC GACGGACCGT TCTTTCACGT CATCGCCGAA GGCAGCAGCG ACGAGCAGGC GCGCGTCCTG GCAGAGAAAT ATGCCGGACT GGTGACGGGG TTGCAGTAG
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Protein sequence | MKAVVMAGGE GSRLRPLTIN RPKPMVPIVD RHVMAHIIEL LKRHGITDIV VTVQYLANVI QDHFGDGSAY GVHIEYSLEE QPLGTAGSVK NAERFLREPF LVISGDALTD FDLTKIIEFH QSHGATATIT LTRVPNPLDY GVVVVDERGY VRQFLEKPSW GEVFSDTVNT GIYVVTPEIF RYIEKGAFTD WSKDVFPRML RSGNLPVGYV AEGYWTDIGT IEEYMRASRD YMQGKVNLPR VGERIFDEVW VEGDVEIAPD AQFHGPVFLG HGVKIKSGAI IHGPSAIRDY TIIDTRATID RSIIWRNSYI GERAELRGAI VMRQCNIKSR AVLFEGTVVG DQTIINAGAV IGANVKIWPS KEVEEGATIS SSIIWGSQGR RVLFGRSGIS GLVNIDLTPE FGARLGAAFG ATLPRGAVVT TSRDTHYTPR MIKRGLVAGL PSAGVHVAEL HDVPLPVARV ITRAINAAGG VHVRLSPLDS RVVDIKFFDA DGLDIDTATE RKIEGVFFRE DYRRVYLDEI GRINEVEHIN QIYTDMFLGA LRPDALASIA RNFQVVIDYA NANTSNFLPA ILRRLHIEAV ELNANLDAQL LFQTPQQFEA GMERLARITP VLEASLGARL DAGGEKIFLV DDTGKRLPGM QALAAITALA LAVNGGGTVA VPVTAPRAFE MIAAKYGGRI VRTRATLGAL MRTAAASRDM LLLGDGAGSV IFPSFYPIAD GMFAIVKIVE LLALQQVRLS EIVRDLPHYF MSQARVPCRW EFKGKVMRIL NQQYQDRKLD QVDGVKIDLG DEWVLILPDP DGPFFHVIAE GSSDEQARVL AEKYAGLVTG LQ
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