| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0738 |
|---|
| Symbol | |
|---|
| ID | 5538204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 964763 |
|---|
| End bp | 966070 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640892894 |
|---|
| Product | CBS domain-containing protein |
|---|
| Protein accession | YP_001430877 |
|---|
| Protein GI | 156740748 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGACGTTG AAATCGGCCT GGTTCTGGCA GGCATTCTTC TCTGTCTCTT CGTTCTGGCA
TTCACATCGG CAATCGATGC AGCAATGACG GCGATCAGTC GCCATCGTCT GGGGTTGCTG
CACGAGACCG ACGCGCGGCG TGCGCAGGTG ATTGACCGCC TGCTCGCCGA GCCATATCGC
TTCAAAGCAA CGGTTCTGCT GCTCAATAGC ACGGCGACCA TAACGGCAAC AGCACTGACC
TTGCGCCTGT GCGACGATCA GATGTGGCAA TGGCGCCTTG CTGCGCTTAC CGGGTTGTTG
CTCGGCATTC TCATCTTCGC CGAAGCATTG CCAAAAGCGC TGGCAATCGG TAACCCTGCG
GCAACTGCAC GCGCGCTCGC CAGTCCAATG GCGCTGATTG CGCGCCTTCT GGCGCCGTTC
ATCTGGGTGA TCGGATTGCT CACCCGCCCG TTCCTTCGTG TCGCCAGCGG GCAGACCACC
TCGTCGATGC CGCTGGTGAC TGAAGAGGAA CTCCGCATGC TGGTGAATGT CGGCGAAGAG
GAAGGGTTGA TCGAACCAGA AGAACGGGAG ATGATCGAAG GAATCTTTTC CTTCGGTGAT
ACAACGGTGC GTGAGGTGAT GATTCCGCGC GTGGATATTG TGGCACTTGA GGAAACTGCC
TCTATCGATG AGGCGCTCAA CATCATCATT ACGACCGGTC ACTCACGTAT TCCGGTGTAC
CGCGAGACGA TCGACCACAT TGTGGGCATT CTCTATGCGA AGGATTTGTT GCTCTGGTTG
CGTTCCGGGC AACGTGATGC ATCGATTGGC GCGCTGCTCC GCACTGCGCA CTTCGTGCCC
GACACGATGA AAGTGGATGC CCTTCTGAAA GACCTTCAGG CGCGCAAAAT CCATCTGGCG
ATCGTTGTCG ATGAGTATGG CGGCACTGCC GGTCTTATCA CTATCGAGGA TGTGATCGAG
GAAATCGTCG GTGAGATTCA AGATGAGTAT GATGTGGACG AGCAGCCGAT CCGGGTGCTT
GCGCCTGGGG ATATGGAGGT GGATGCGCGT GTGCCGATCG ATGATATCAA CGATCTTACC
GGGTTGCGTC TGGCGTCGGA GGAGTCGGAT CGGATTGGGG GGATGGTGTT CGAGCGCCTT
GGTCGGGTGC CGAAAGTCGG TGATACGGTG CAGATCGCCG ATGGCGTGAC CGTTGTGGTC
CTCTCGATGG ATGGTCTGCG CCTGCGGAAG TTGCGCCTAC AGTATCGGTT GCCTCAGGAA
GATGCAATTT CTGCCACGCC TGGCGAAGAT CGAAAGAATC ATGAGTGA
|
|---|
| Protein sequence | MDVEIGLVLA GILLCLFVLA FTSAIDAAMT AISRHRLGLL HETDARRAQV IDRLLAEPYR
FKATVLLLNS TATITATALT LRLCDDQMWQ WRLAALTGLL LGILIFAEAL PKALAIGNPA
ATARALASPM ALIARLLAPF IWVIGLLTRP FLRVASGQTT SSMPLVTEEE LRMLVNVGEE
EGLIEPEERE MIEGIFSFGD TTVREVMIPR VDIVALEETA SIDEALNIII TTGHSRIPVY
RETIDHIVGI LYAKDLLLWL RSGQRDASIG ALLRTAHFVP DTMKVDALLK DLQARKIHLA
IVVDEYGGTA GLITIEDVIE EIVGEIQDEY DVDEQPIRVL APGDMEVDAR VPIDDINDLT
GLRLASEESD RIGGMVFERL GRVPKVGDTV QIADGVTVVV LSMDGLRLRK LRLQYRLPQE
DAISATPGED RKNHE
|
|---|
| |