Gene Rcas_0724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0724 
Symbol 
ID5538189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp946886 
End bp948151 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content59% 
IMG OID640892879 
ProductGlu/Leu/Phe/Val dehydrogenase 
Protein accessionYP_001430863 
Protein GI156740734 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTCTG ATCGTGACAA CCCGTTTCGG ATCGCTCAAG AGCAGTTTGA CCGCGCGGCG 
GCGCTGCTCG AACTGCCCGA TAATGTGCGC GAGGTCTTGC GCGTCCCGCA ACGCGAGTTG
ACCGTGCGTT TTCCGGTGAT GATGGATGAT GGTTCGACCC GTATCTTTAC CGGGTATCGG
GTGCAACATA ATCTTGGACG TGGACCAACC AAAGGCGGCA TTCGCTACCA TCCGAGCGTC
GATATTGACG AAGTGCGCGC TCTTGCCATG TGGATGACCT GGAAGTGCGC GCTGGTTAAC
ATCCCGTATG GCGGCGCGAA GGGAGGGGTC GTCTGCGATC CTGCCCAACT TTCTTCTGGT
GAACTCGAAC GCCTGACCCG CCGTTTTGCA ACCGAAGTTG CAATTGTGGT CGGTAGTGAG
CGTGATATTC CTGCTCCCGA TGTTAATACT AATCCCCAGA TTATGGCATG GTTCATGGAT
ACCCTCTCCA TGCAGCAAGG GCACACGATC AATGCCGTCG TCACCGGTAA ACCGATTGAG
GTTGGCGGCT CGTTGGGGCG AAATGAGGCG ACAGGGCGCG GCGTCAGCCT CATGGTGCGC
GAATGGGCGC GGCGTCAGCG CCGGCGACTG GAGGATTTGC GGGTAGTGGT GCAAGGGTTC
GGAAATGTCG GTGGTGTGGC TGCATCGCTC ATTTCTGCGC TGGGGTGCAG GGTGATCGCT
GTTGGGGATG CCAGCGGCGG GTATTTGTGT CGCAATGGAC TCAATATTGC GGAGATGCGC
CGGTATGCCG CGCAGCATCC GCGTCGATTG CTGGAAGGAT ACAGCGCTCC CGGGGTCGAG
CGCATCGATA ACCGCGCGTT GCTCGAAACG CCGTGCGATG TGCTGGTTCC GGCGGCGCTG
GAAAATCAGA TCACCGATCA GAATGCCGAA CGTATCCGTG CAACGCTCAT CGTCGAAGGC
GCAAACGGTC CGACAACCCC GCAGGCGGAT GAAATCCTCG AGGAACGCGG GATCGTCGTT
GTTCCCGATA TTCTGGCGAA CGCTGGCGGC GTGACGGTCA GTTACTTCGA ATGGGTCCAG
GGATTGCAAT CCTTCTTCTG GAATGAACAG GATGTCAATC ATCGTCTGGA ACAGATTATG
GTCAGCGCCT TCGAGCAGGT GTGCGACCTT GCGGATCGGC GCGGCATCTC TCTGCGTCTG
GCAGCGTACC TCCTGGCAGT GCGTCGCGTT GCAGACGCCA ATCTTATTCG CGGGCTGTAT
CCGTAG
 
Protein sequence
MRSDRDNPFR IAQEQFDRAA ALLELPDNVR EVLRVPQREL TVRFPVMMDD GSTRIFTGYR 
VQHNLGRGPT KGGIRYHPSV DIDEVRALAM WMTWKCALVN IPYGGAKGGV VCDPAQLSSG
ELERLTRRFA TEVAIVVGSE RDIPAPDVNT NPQIMAWFMD TLSMQQGHTI NAVVTGKPIE
VGGSLGRNEA TGRGVSLMVR EWARRQRRRL EDLRVVVQGF GNVGGVAASL ISALGCRVIA
VGDASGGYLC RNGLNIAEMR RYAAQHPRRL LEGYSAPGVE RIDNRALLET PCDVLVPAAL
ENQITDQNAE RIRATLIVEG ANGPTTPQAD EILEERGIVV VPDILANAGG VTVSYFEWVQ
GLQSFFWNEQ DVNHRLEQIM VSAFEQVCDL ADRRGISLRL AAYLLAVRRV ADANLIRGLY
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