Gene Rcas_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0720 
Symbol 
ID5538185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp943302 
End bp943979 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content63% 
IMG OID640892875 
Productmethyltransferase type 11 
Protein accessionYP_001430859 
Protein GI156740730 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGGTG ATGTGACTGC TGCGCCCCTT AATCCTTTTG ATGCGCCTGA ACTGGCGGTG 
GGCTACGAAG CCTGGTATGC GACGGAGGGC CGGGCTGCGG ATCAGGCTGA GCGCCGCTTG
CTGACATGGC TGCTGTCCGG TCTGCCGCAG CCGCAGACGC TGGTGGAGAT CGGTGTTGGA
ACCGGGCATT TTGCACGCTG GCTGGCGTCG GAGGGGTACC GTGTCGTCGG CGTGGATCGG
TCGGCGCCAA TGCTTGCCGA GGCGTTGCAA CGTGGCAGTG TGCCGCTGAT ACGCGCCGAT
GCGGCAGATT TGCCATTCGC CAACGATGCG TTCGATGTTG CGCTGCTGAT AACGACATTG
GAATTTTTGC CCTGCCCAGA GCGTGCGTTG CAGGAAGCAG CGCGTGTGGC GCGGCAGGGG
ATGATCCTGG GGGTGCTCAA TCGCTGGCAT CCCCTGGCGT GGCAACGGAA GCGCAGCGGG
TTGTCCGTCT GGCAGGTTGC CCGTTTCTAC GCTCCGCCTG AACTGGCGCG GTTGGTGCAC
CAGGCGCTTC ATCGATCGGT CGCCAGTATG ACCTGGCGCA CGACACTTTT GCCGGCTCCC
TGGGTGCAAT CTTCTTCTCG CCTGCCGGTC GGCGCATTTA TTGGGATGCG AGTGGTGCTG
TCGAAGTGGA AGGGATGA
 
Protein sequence
MRGDVTAAPL NPFDAPELAV GYEAWYATEG RAADQAERRL LTWLLSGLPQ PQTLVEIGVG 
TGHFARWLAS EGYRVVGVDR SAPMLAEALQ RGSVPLIRAD AADLPFANDA FDVALLITTL
EFLPCPERAL QEAARVARQG MILGVLNRWH PLAWQRKRSG LSVWQVARFY APPELARLVH
QALHRSVASM TWRTTLLPAP WVQSSSRLPV GAFIGMRVVL SKWKG