| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0717 |
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| Symbol | |
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| ID | 5538182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 939958 |
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| End bp | 941874 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640892872 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_001430856 |
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| Protein GI | 156740727 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGACA ATCGCTGGCT GAAGAATAGT TTCGTCTACC TCATCATCCT GGTCGCTGCA
TTGGCGCTGT TCTTCAATTA TTTCAACAAT GCGCAGGGTC AGGCGGAGGA ACGGGGCATC
TATCAGGTGC TCGCAGATGC CAAAGCTGGC AGGGTTGAGA AGATCGAAGC GCAGTCGGGC
AACACCGAGA TTCTGGTGAC GTACCGCGAT ACCAGAACGA AAGTGCGGTC GCGCATTGAG
TCGAATGATA GTATCACGAT GCTGCTGGTG CAGGCTGGTG TGCCGCTCGA CGCGGTGAAT
GTCGAGGTGC GCGCGGCGCC TGCCTGGGGC GGGTTGCTGA ATGTTTTCAC CATCCTGTTG
CCGGTATTGT TGATGATCGG CTTTTTTGTC TTCTTCATGC GTCAGGCGCA AGGGTCGAAC
AATCAGGCGC TGTCGTTTGG CAAGAGCCGG GCGCGTATGT TCTCTGGCGA TAAGCCGACG
GTGACGTTTG CCGATGTCGC CGGTCAGGAA GAAGCCAAAC AGGATTTGAC CGAGGTTGTT
GAGTTTCTTA AGTTTCCTGA CAAGTTTGCG GCGCTTGGTG CGCGTATTCC GCGCGGCGTG
CTGATGGTTG GTCCTCCGGG AACCGGCAAG ACGCTCCTGT CGCGTGCGGT CGCCGGCGAG
GCAGGGGTGC CGTTCTTCTC AATCTCTGGT TCGGAGTTCG TTGAGATGTT CGTCGGTGTC
GGCGCCAGCC GTGTGCGCGA CCTGTTCGAC CAGGCGAAGC GGAATGCGCC CTGTATTGTG
TTCATCGACG AGATCGACGC GGTCGGTCGG CAGCGTGGCG CCGGGCTTGG CGGCTCGCAC
GACGAACGCG AGCAGACGCT CAATCAGATT CTGGTTGAGA TGGATGGCTT CGATACCAAT
ACAAACGTTA TCGTCATTGC CGCCACCAAC CGACCAGACG TGCTCGATCC GGCGCTGGTG
CGCCCCGGTC GCTTCGACCG CCAGGTGGTG CTCGATGCGC CGGATGTGAA AGGGCGTATT
GAGGTGCTCA GGGTGCATAC CAAGGGTAAG CCGCTTGCCG ATGATGTGCA ACTCGATGTC
ATCGCAAGGC AGACGCCCGG CTTCTCTGGG GCCGATCTGG CAAATGCGGT GAACGAGGCG
GCGATTCTGG CGGCGCGCCG TTCGAAGAAG AAGATTGGCA TGGCAGAGTT GCAGGACGCG
ATTGAGCGCG TGGCGCTCGG TGGTCCTGAG CGACGCAGCC GGGTGTTGAC CGAACGGGAA
AAATTGCTGA CGGCGTATCA CGAATCCGGT CACGCGATTG CGGCGGCGGG TATGCCGAAA
GCCTTTCCGG TGCAGAAGGT GACGATTGTG CCGCGTGGAC GAGCCGGCGG GTATACGCTC
TATCTGCCCG AAGAGGATAG TATTCGTTAC ACAACTGCGT CGCAGTTCGC AGCGCAACTC
GTCTCGGCGC TTGGCGGGCG CGTGGCAGAA GAGATTGTCT TCGGACCTGA TGAGGTCTCG
ACGGGGGCGG CGGGTGATAT TCAGCAGGTG ACACGCATTG CGCGCGCGAT GGTGACCCGC
TATGGCATGA GTGCGAAGCT TGGTCCGATT GCATTCGGTG AGCGCGAGGA GTTGATCTTC
CTGGGGCGCG AGATTACTGA GCAGCGCAAC TATAGCGATG CTGTGGCGCG CGAGATCGAT
AACGAAGTGC ATCGCATCGT TTCAGAAGCG TATGAGCGTA CTCGCCTGAT CCTGACGTAT
AACCGCGAGG TGCTGAACGA TATGGCCAGT GCGCTGATTG AGTATGAAAC GCTCGATGGT
GAACGCTTGA AAGAATTGAT CAGCCGTGTC GTGAAGATCG ATGAGATTGA GCGTCGCCCG
AACGGTGGCA ACGGGGTGCT GGATACTTCA TCAACGCTGA CTGCGCCGCA GGCATAG
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| Protein sequence | MGDNRWLKNS FVYLIILVAA LALFFNYFNN AQGQAEERGI YQVLADAKAG RVEKIEAQSG
NTEILVTYRD TRTKVRSRIE SNDSITMLLV QAGVPLDAVN VEVRAAPAWG GLLNVFTILL
PVLLMIGFFV FFMRQAQGSN NQALSFGKSR ARMFSGDKPT VTFADVAGQE EAKQDLTEVV
EFLKFPDKFA ALGARIPRGV LMVGPPGTGK TLLSRAVAGE AGVPFFSISG SEFVEMFVGV
GASRVRDLFD QAKRNAPCIV FIDEIDAVGR QRGAGLGGSH DEREQTLNQI LVEMDGFDTN
TNVIVIAATN RPDVLDPALV RPGRFDRQVV LDAPDVKGRI EVLRVHTKGK PLADDVQLDV
IARQTPGFSG ADLANAVNEA AILAARRSKK KIGMAELQDA IERVALGGPE RRSRVLTERE
KLLTAYHESG HAIAAAGMPK AFPVQKVTIV PRGRAGGYTL YLPEEDSIRY TTASQFAAQL
VSALGGRVAE EIVFGPDEVS TGAAGDIQQV TRIARAMVTR YGMSAKLGPI AFGEREELIF
LGREITEQRN YSDAVAREID NEVHRIVSEA YERTRLILTY NREVLNDMAS ALIEYETLDG
ERLKELISRV VKIDEIERRP NGGNGVLDTS STLTAPQA
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