Gene Rcas_0715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0715 
Symbol 
ID5538180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp937061 
End bp938851 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content63% 
IMG OID640892870 
Productaldehyde ferredoxin oxidoreductase 
Protein accessionYP_001430854 
Protein GI156740725 
COG category[C] Energy production and conversion 
COG ID[COG2414] Aldehyde:ferredoxin oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGC AAGCACTCCG CGTTGCACTG ACCGATCAGC GCGTAATGAC AGAGTATTTG 
CCTGCTGAGG TGGAACAACG CTTCCTCGGC GGGCGCGGCG CCGCCGCCTG GCTCCTTGCC
CGATGGGTTC CTTCGAAGAT TGGCCCGCTG GCGCCTGCTA ATCTCCTGAT CTTTAGCGCC
GGACCGCTTG CGGGGGTGAC GTTCGGTGGA TTAACCGTTA CGACGCGCTC GCCGATTACC
AATTCGGTTT CGCACGGGTG GGCGTCAGGA AGGTGGGGAG CGCACCTGCG TCGTGCCGGG
TACGATCTGC TGATCCTCGA AGGGCAAAGC CCCGATTGGT GCTGGATTCG AATCGATGGA
TCGCAGGTGG ATATTCTTCC GGCGACGCGC CTCCTCGGTC TCGATACGCA AGCGACGAAT
CAGGCGTTGC GCCGGGATCT CGGTGATGAG TATGCTGTGC TCTGCATCGG ACCGGCGGGG
GAAGCGGGTG TTGCGTATAG CGCTATTGTC GCAGAAGGCG CGTTCGCAGT CGAACCGGCA
GGCGCCGGCG CGATCATGGC GCGCAAGCGC GTGAAGGCCA TCGCCGTGCG TGGCGCGCAC
CCATGCCCGG TTGCCGACCG GCAGCGGCTC GATCAGGCGC TGGAAAGCAT CAACCGACGC
ATTGCCGCCA GCGATGTCGC AGCCGGTTTT CGTCAGTATG GCAGCCTGTG CTATGCGCAG
CGCGCCGAAG AACTGGGCGC CTTGAGCGCG CGCAATGGGC AATCCCATAC TGTGTCGCAT
GCCAGCGCGA TCAGTCGAAC AGCGCTGGCA CAGCGCGGTC GGCGCGAATC ACGCGGTTGC
GAAGGATGTC TGCTGGCATG TCATAGTGCG TATATCCGCA AAAATGGCGA ACCGGTCGCC
TATCCCGATC TGGAGGCGCT CGCTGGCTTT GGCTGGCGGT GCGGGTTATC CACTCCTGAT
GCGATTATTC TCGTTAACGA TCTCTGCCTG CGCCTTGGTC TCGATGTGTC GGAAACCAGC
GCGGCGCTGG CGTTTGTGAT GGAGTGCCGC GAGCGTGGGT TGATCCATGC CGGCAATCTG
GCATGGGGCG ATCTCGAATC GGTGGTCGGC GCTCTTCGCC GCCTGGGGCA GCGCCAGGAA
AAGCGCGATA TTCTGTCGCT GGGCGTCGGC GAAATGCAGG AGGTATACTA CGGAAGTAGT
GCATTTGCGC CACAAGTGCG TCAACTTGCG TTCCCGGCGC TCGATCCGCG CGCGTTGCCC
GAAATCGCCC TGGCAGACGC CACTGCACCG ATTGGCGGCG ACTACCGTTA CGCGATGATC
TACGAGCCGT TCCTCGTCGA ACCGCCTGTC TGGCTTCCCA CTGACCCCAG CAATCCCCAC
TCGATCCAGG GCGTCGTCCC ACGCTTGATC TGGCACGAAC GGTTTGCGGC GGCGGTCGAT
GCCGCAGGAT TGTGTCGTCG CCTGGCGCTG CTGGCGTATC AGATCGCTCC TGCCGAACTG
AATGAACTTC TGGCTGCAAC GCTTGGGCGA TCCTTCACCA GTGTCGATGT GGCGAAGATT
GGGGAACGGA TCGTTACGCT CGAACGCTGG CTGGCGGTTC AGTATGGCGC GGGACGCGAT
ACGCTGCCGC ATCGCTGGAC GGAAGAACCG CTCGAAGACG GTCCGGCGGC AGGAAAGTTG
CCGCTGCTGA ATGACATGCT GGCGGAGTAT TACCGTCGTC ACGGTTGGGA TGAACAGGGA
CGCCCCTCGG AAGCGCGCCT GACTGAGTTG GGGATCACCC TGCCTGCCTG A
 
Protein sequence
MPLQALRVAL TDQRVMTEYL PAEVEQRFLG GRGAAAWLLA RWVPSKIGPL APANLLIFSA 
GPLAGVTFGG LTVTTRSPIT NSVSHGWASG RWGAHLRRAG YDLLILEGQS PDWCWIRIDG
SQVDILPATR LLGLDTQATN QALRRDLGDE YAVLCIGPAG EAGVAYSAIV AEGAFAVEPA
GAGAIMARKR VKAIAVRGAH PCPVADRQRL DQALESINRR IAASDVAAGF RQYGSLCYAQ
RAEELGALSA RNGQSHTVSH ASAISRTALA QRGRRESRGC EGCLLACHSA YIRKNGEPVA
YPDLEALAGF GWRCGLSTPD AIILVNDLCL RLGLDVSETS AALAFVMECR ERGLIHAGNL
AWGDLESVVG ALRRLGQRQE KRDILSLGVG EMQEVYYGSS AFAPQVRQLA FPALDPRALP
EIALADATAP IGGDYRYAMI YEPFLVEPPV WLPTDPSNPH SIQGVVPRLI WHERFAAAVD
AAGLCRRLAL LAYQIAPAEL NELLAATLGR SFTSVDVAKI GERIVTLERW LAVQYGAGRD
TLPHRWTEEP LEDGPAAGKL PLLNDMLAEY YRRHGWDEQG RPSEARLTEL GITLPA