Gene Rcas_0701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0701 
SymbolfabG 
ID5538166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp922383 
End bp923126 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content58% 
IMG OID640892857 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001430841 
Protein GI156740712 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000555171 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTCGTC TCGAAGGAAA GTACGCAATC GTGACAGGCG CTTCGCGCGG AATCGGGCGT 
GCCATCGCGC TGGAACTGGC ACGTGAAGGA TGCATCGTCG GCGTTAATTA CCAGCACAAC
CAGGCGCTGG CAGAAGAGGT CGCGGCGGAG ATCAAGTCAA TGGGGCGCGA ATGCATGTTG
TTGCAGGCGA ATGTCGCCGA TCCGACCGAA GCGCGCGCCA TGGTCAGGCG ATTCCTCGAC
GCCTACGGGC GGCTCGATAT TATGGTTAAT AACGCTGGCA TTACCCGCGA CCGGTCGCTG
CGGAAGATGA CCGACGAGGA CTGGCTCCAG GTCATTCAGA CGAACCTTAA CGCTGTCTTT
TTCTGTACCA CCGCTGCCAT GCAACCGATG ATCGAACAAC AGTATGGGCG CATTATCAAC
ATCAGCTCGA TGAATGGTCA GACTGCCGCT TTCGGTCAGG CGAACTACGG CGCGAGCAAA
GGCGGGATCA TCGCCTTCAC CAAGACCGCA GCGCTCGAAC TGGCAAAGTA CGGCATTACC
GTGAATGTCG TCGCTCCGGG GTTTACGCTC ACCGATATGC TCTCGAAAGT TCCCGAGGAG
GTGCAGAATC AGATCAAGGC GCGCATCCCG CTAGGTCGCT TCGGTCTGCC GGAGGAAATG
GCGAAGGCAG TGGTCTTCCT TGCTGCCGAC GGCGATTACA TCACGGGCCA ACAGATCAAT
GTCAATGGTG GGGCGTATAT GTGA
 
Protein sequence
MGRLEGKYAI VTGASRGIGR AIALELAREG CIVGVNYQHN QALAEEVAAE IKSMGRECML 
LQANVADPTE ARAMVRRFLD AYGRLDIMVN NAGITRDRSL RKMTDEDWLQ VIQTNLNAVF
FCTTAAMQPM IEQQYGRIIN ISSMNGQTAA FGQANYGASK GGIIAFTKTA ALELAKYGIT
VNVVAPGFTL TDMLSKVPEE VQNQIKARIP LGRFGLPEEM AKAVVFLAAD GDYITGQQIN
VNGGAYM