Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0697 |
Symbol | |
ID | 5538162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 915946 |
End bp | 917466 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640892853 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001430837 |
Protein GI | 156740708 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000262874 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000717801 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGTTGACTC TTCTGGATGT TCTGACGACC GGCGAACCTG ACGCACCTGC GTTGCTGTCG CCGGATATGT CGCCGCTGCC GTTCGCCAGG TTGCGTGAGC ATGTGGTGGA ACTGGCGGAA CGCCTCGCTG CGTTTGGAGT GGCTCGTGGC GAGCGGGTGG CGATTGCGCT GGGCAATGGT CCTGCAATGG CGCTGAGTTT CCTGGCAGCG GCGACATGCG CAACGGCTGC GCCGCTCAAT CCGAAATACC GCCAGGACGA GTTTGCGTTT TCCTTCGCAG ATACCCGCGC AACGACCCTG ATTGTGCCGC CAGAGGGAAT GGCAGCGGCG CGCGCCGCCG CCTCGCCTGC CATGACCGTT GTGACGGCAT CGATCCGCAG CGATGGTGCG CTCGATCTGG CGCTGGAACG CGGCGCGCGC GCGGCGCAGC CGTGGACGCC GCCGCAACCG GACGATGTGG CGCTCATTCT GCATACTAGC GGCACTACCA GCCGCCCCAA GCGGGTGCCG TTGCGCCAGC GTAATCTGGT CGCCTCGGCG CGCAATATTG TCGCAGCGTA TCGGTTGACG CCTGATGATC GGGCGCTGTG CGTGATGCCG CTCTTCCATA TCCACGGCAT CGTTGCGACC TTGCTGGCGC CGCTTGCATC CGGCGGGTCG GTCGTTCTTC CTCCCGGTTT CGATGCTATG CGCTTCTGGG GCTGGCTGAC TGCCTTCCGC CCCACATGGT TCTCGGCGGT GCCGACGATG CATCAGATGC TGCTAGCGCG CGCTGAACGC CAGTTGGCTG CGATCCGTGC AGCGCCGCTG CGCTTCATCC GTTCCAGCAG CGCGCCGCTG CCGCCGGTCG TCCTTGAACA CCTTGAAGCG GCATTTCAGG CGCCGGCGAT CGAGTCGTAT GGCATGACCG AAGCAAGCCA TCAGATGACC ACCAACCCGC TGCCGCCGCT GCCGCACTAT GCCGGTTCTG TCGGGTATGG CTTCGGCGTG GAGGTGACGA TCCTCGACGA CCATGGTGTT GAACTGCCGC GCGGTGAACG CGGTGAGGTC GCCGTGCGAG GACCGAATGT GTTCGATGGC TATGAGAACA ACCCGGAAGC CACTGCTGCC GCATTTACAA ACGGTTGGTT CCGCACCGGC GACCAGGGAC GGATCGATGA ACAGGGGTAT CTGTGGCTGA CGGGACGCCT CAAGGAATTG ATCAATCGCG GCGGTGAGAA GATTTCACCG CTCGAAATTG ACGATGTGCT GCTCCGACAT CCGGCAGTGG CGGAGGCTGT CGCGTTCGCT GCGCCGCATC GGACACTTGG TGAAGAGGTC TACGCCGCTG TGGTGTTGCG CTCGGAAGCG ACCGAGCGAG AACTGCGCGA GCATTGCGCT GCATTTCTGG CGGATTTCAA GGTGCCGCGC GTTATTCACA TTCTGTCGGA GATTCCACGC GGCGCAACCG GGAAGGTACA GCGGCTTGCA ATGGCAAAAC TGCTGGGATT GACTGACGAC TCATCGGGGA GTGCGCAATG A
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Protein sequence | MLTLLDVLTT GEPDAPALLS PDMSPLPFAR LREHVVELAE RLAAFGVARG ERVAIALGNG PAMALSFLAA ATCATAAPLN PKYRQDEFAF SFADTRATTL IVPPEGMAAA RAAASPAMTV VTASIRSDGA LDLALERGAR AAQPWTPPQP DDVALILHTS GTTSRPKRVP LRQRNLVASA RNIVAAYRLT PDDRALCVMP LFHIHGIVAT LLAPLASGGS VVLPPGFDAM RFWGWLTAFR PTWFSAVPTM HQMLLARAER QLAAIRAAPL RFIRSSSAPL PPVVLEHLEA AFQAPAIESY GMTEASHQMT TNPLPPLPHY AGSVGYGFGV EVTILDDHGV ELPRGERGEV AVRGPNVFDG YENNPEATAA AFTNGWFRTG DQGRIDEQGY LWLTGRLKEL INRGGEKISP LEIDDVLLRH PAVAEAVAFA APHRTLGEEV YAAVVLRSEA TERELREHCA AFLADFKVPR VIHILSEIPR GATGKVQRLA MAKLLGLTDD SSGSAQ
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