| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0647 |
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| Symbol | |
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| ID | 5538110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 849675 |
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| End bp | 850736 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640892804 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_001430790 |
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| Protein GI | 156740661 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.8957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTGT TGACCGACAC CATCACGCGG ATCGGATCAC TCGACAGTGC CGCCGCAACC
GCAGCGCAGG CGCGGCAGGA TGTGCTGACC AAGCCGCAGG GTGCGCTGGG ACGTCTGGAG
ACGTTGTCCG TTCAGATCGC GGGGATCACC GGGCAGACAC GTCCTCGCCT GAACAACCCG
GCGGTCATCG TTATGGCTGC CGATCACGGC GTTGCGCGTC GCGGGGTGAG CGCCTATCCC
TCGGAGGTGA CATCGCAGAT GGTGTTGAAC TTCCTCAACG GCGGAGCAGC GATCAATGTG
CTTGCCCGTC ACATCGGCGC GCGCGTGATT GTGGTGGATA TTGGCGTGGC AGCGAACTTG
CCGTCGCACT CCGAACTGAT CGACCGCAAA CTCGGTATGG GAACAGCAGA TTTTTCGGTC
GAGCCGGCAA TGAGCCGCGC GCAGGCACAA CAGGCAGTCG AAATCGGCAT TGCGTGCGCC
TATGATGCTA TCGCCTCCGG CGTCGATCTG CTGGCAACCG GCGACATGGG CATCGGTAAC
ACCACTGCAT CGAGCGCCGT TGTTGCTGCT ATCACCGGTC GTCCGGTCGC CGAGGTGACC
GGGCGCGGCG CCGGGATCGA CGATGCCGGG CTGGCCCGCA AGATTGCGGT TATCGAGCAG
GCGCTGGCGC TACACCATCC CGATCCGCGC GATGCGCTGG ATGTGCTGAC AAAGGTCGGC
GGCTTCGAGA TCGGCGGGCT GGCGGGAGTC ATTCTGGGTG CGGCAGCGCG ACGTGTGCCG
GTTGTCATCG ATGGTTTCAT CTCCGGTGCG GCAGCGCTGA TCGCCTGCAC CCTGGCGCCA
TCGGCGCAAC CCTTCCTGAT CGCCGCACTC CGCTCGGTCG AACGAGGGCA CGATGCGGTC
TTTGCTCATC TCGATCTGAC CCCACTCTTC GACCTGGGCA TGCGTCTCGG CGAGGGAACC
GGCGCGGTGC TTGGTATGTC GCTCTGCCAG GCAGCCTGCA AGATTCTCGA TGAGATGGCG
ACGTTCGGCG AGGCGGGGGT GTCGGGGAAG GTCGAGGGCT GA
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| Protein sequence | MSLLTDTITR IGSLDSAAAT AAQARQDVLT KPQGALGRLE TLSVQIAGIT GQTRPRLNNP
AVIVMAADHG VARRGVSAYP SEVTSQMVLN FLNGGAAINV LARHIGARVI VVDIGVAANL
PSHSELIDRK LGMGTADFSV EPAMSRAQAQ QAVEIGIACA YDAIASGVDL LATGDMGIGN
TTASSAVVAA ITGRPVAEVT GRGAGIDDAG LARKIAVIEQ ALALHHPDPR DALDVLTKVG
GFEIGGLAGV ILGAAARRVP VVIDGFISGA AALIACTLAP SAQPFLIAAL RSVERGHDAV
FAHLDLTPLF DLGMRLGEGT GAVLGMSLCQ AACKILDEMA TFGEAGVSGK VEG
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