| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0637 |
|---|
| Symbol | |
|---|
| ID | 5538100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 837993 |
|---|
| End bp | 840506 |
|---|
| Gene Length | 2514 bp |
|---|
| Protein Length | 837 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640892794 |
|---|
| Product | precorrin-3B C17-methyltransferase |
|---|
| Protein accession | YP_001430780 |
|---|
| Protein GI | 156740651 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1010] Precorrin-3B methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain)
[COG2073] Cobalamin biosynthesis protein CbiG |
|---|
| TIGRFAM ID | [TIGR01466] precorrin-3B C17-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.647433 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTATCA CGATCATTGC CGTCACCCGC GCCGGTGCGC GCCTGGCGGA ACGTCTGGCG
CCGGAATTGA ACGCCGTCGC GCGCGTGCCG GCAAAATTCG CCGGCGAAGC AATCATCGCA
ACACCGTATA CGGCATCATT GTCTGATGAA GTGCGCTACT GGTGGGGACG CAGTCGCGCG
CTGGCGTTGA TCATGGCGAG TGGTATTGCC GTGCGCACGA TTGTGCCGCT CATAAGCCAT
AAAACCACCG ATCCGGCGGT CGTCTGCCTC GATGAAGCCG GCAGGTTCGT CATCCCGCTG
ATCGGCGGAC ATCAGGCAGG CGCCAACGAC CTGGCGCGCC GGATCGCCGC GCTCACCGGC
GGTCAGGCGG CGATCACCAC TGCCAGCGAT ACGCAGGGGT TTCCTGCGCT CGACATGATC
GGGCGCAACA AGGGTTGGCG GATCGCCGGC GACTCGGCAC TCACGCATAC GATGGCGTGC
CTGGTCAATG GAGACCTGAT CGGATGTTGG GTTGAACCCG ATCTGCCTGA TGCTCGCAGG
TGGATGGAAA ACCATCTGGC GCTATGCCCA AACATTGAGT TCGTCAACAC CGCTGCCGAT
CTGATGGATG CCCGGTATGC CGCGGCGCTC CTGGTCACAC ATCATCAGAT CAATGACCTC
TGGAAGAAAC TGCGGGCGAA GAGCGTGCGT TACCTGCCGC CGGTCCTGGT TGTCGGCATT
GGGTGTCGGC GCGGTGTTTC GGTCGATGAG TTGTACGATG CGTTGCGCAC AACCCTCGCC
GATGCCGGTC TCGATGAACG GTGCGTGGGA GCGCTCGCTA CGGCTGAGAT CAAGGCGGAT
GAGCCGGGAC TGATCGCCCT TGCCAACAGG CTTGCCATCC CTCTGCATGT GGTTTCGACC
GCCGAACTCG CTGCGCTTGA TGCCACGAAG TTCAGCCGCA GCGCCGCAAC CGTGCATTTC
GACCTGCCCG GCGTCGCCGA GCCATGTGCC GTGATCGTCA GCGGCGGCCC GCTGCTCGTG
CCCAAGCGCG CATTCCCGCG CTGCACCATT GCCACTACCC TGGCAGAACA TGGCACGCTC
CGGGGGACAA GGCATATGGG GGCGCACGGC TCCACACGGA TCGGGACCAA TTCCCACGGA
TCGATTGTTT CCCATCCCGC ACCAAACCGT GAACATCCGT CGCATCCGCG CAAATCCGTG
GTCCCTTCGC GCCCGACCAT CCCCAAACAT GATCAACCGT CGGGTGTCCT TACGCTGGTC
AGCATCGGTC CCGGTGATCC GCAGCACCTC ACCTTTGCCG CGCGCGAAGC GCTGCGCCGC
GCCGAGATCG TGGCAGGCTA TCGGGTCTAT ATCGACCTGG CGCTTCCGCT GCTGCAACCC
CATCAGGAGG TGCTGGTCAC CCCGGCAATG GGGGACGAAG CCGGGCGGGC ACGGCACGCC
ATCGAACTGG CGCGCGCCGG TCGGCGGGTG GCGCTGATCA GCAGCGGCGA CATTGGCATC
TACGCTATGG CTGCGCCGGT ATTCGAGGCG CTGCGCGACG ACGGTTGGAC GGGAGATGAT
CCGGTAGTCG AAGTCATTCC GGGCATCAGC GCCTTCCAGG CGCTCGCGGC GCGTCTCGGC
GCGCCGGTCA GCCACGATTT CTGTGTCATC AGCCTGAGCG ACCTGCTGAC GCCGTGGGAG
GTGATCGAAC GTCGGTTGCG AGCCGCAGCG CAGGCGGATT TTGTCGTTGC GTTGTACAAT
CCGCGGTCGC GCGGGCGTGA CTGGCAACTC GACGCCGCGC TGCGCATCCT GCGCACCCAC
CGTCCGCCGA CGACACCGGT CGCATTTGGG CGTAACGTTT CGCGCGACGA TGAGCATGTG
ATCCTGACGA CGCTTGCAGC GGCAGACCCG TTGGACGCCG ATATGTTCAC TGTGGTGCTG
GTGGGGAACA GTCAGAGTTA TATGCTGGGT GAAAGAATGG CGACGCCACG TGGCTACACT
GCCAGAGCGC AGTCGGAAGC GAACCGTTCC GAAGCATTCC CGGCATCGAA TCAGACCCCG
CGCGAATATC CCATTGTGCT GACCGACACC AGCAGGCTGT CCGCTATTGT GATCGGCGGC
GGCGCAGTCG GTGAGCGCAA GGTGCGTGGG TTGCTGGAGG TGGGCGCATC GGTGCGCCTG
GTCAGCCCGA CCGCTACGCC GCAACTGGCA GCGTGGGCAG AAGCGGGACG GATCACCTGG
GATCAGCGCG CATATACGCA AGGCGATCTC GCGGGGGCAT TGCTGGCATT CGCTGCCACC
AGTGATCGCA GCGTCAACTC CCGGATTGCG CGCGACGCTG CGGTCGCAGG AATCCTCTGC
AACGTCGCGG ATGCACCGGA GGAGGGATGC TTTCACGTAC CCGCCGTCTA TCGATCCGGC
GGTGTAACGA TTGCTGTGAG TAGCGGCGGC GCAGCCCCCG CGCGCGCCGC CGCCCTGCGC
GATGCGATTG CGCAGTGGCT GGGACAATCG CTGAACATCG AAGGTCACCG GTAG
|
|---|
| Protein sequence | MSITIIAVTR AGARLAERLA PELNAVARVP AKFAGEAIIA TPYTASLSDE VRYWWGRSRA
LALIMASGIA VRTIVPLISH KTTDPAVVCL DEAGRFVIPL IGGHQAGAND LARRIAALTG
GQAAITTASD TQGFPALDMI GRNKGWRIAG DSALTHTMAC LVNGDLIGCW VEPDLPDARR
WMENHLALCP NIEFVNTAAD LMDARYAAAL LVTHHQINDL WKKLRAKSVR YLPPVLVVGI
GCRRGVSVDE LYDALRTTLA DAGLDERCVG ALATAEIKAD EPGLIALANR LAIPLHVVST
AELAALDATK FSRSAATVHF DLPGVAEPCA VIVSGGPLLV PKRAFPRCTI ATTLAEHGTL
RGTRHMGAHG STRIGTNSHG SIVSHPAPNR EHPSHPRKSV VPSRPTIPKH DQPSGVLTLV
SIGPGDPQHL TFAAREALRR AEIVAGYRVY IDLALPLLQP HQEVLVTPAM GDEAGRARHA
IELARAGRRV ALISSGDIGI YAMAAPVFEA LRDDGWTGDD PVVEVIPGIS AFQALAARLG
APVSHDFCVI SLSDLLTPWE VIERRLRAAA QADFVVALYN PRSRGRDWQL DAALRILRTH
RPPTTPVAFG RNVSRDDEHV ILTTLAAADP LDADMFTVVL VGNSQSYMLG ERMATPRGYT
ARAQSEANRS EAFPASNQTP REYPIVLTDT SRLSAIVIGG GAVGERKVRG LLEVGASVRL
VSPTATPQLA AWAEAGRITW DQRAYTQGDL AGALLAFAAT SDRSVNSRIA RDAAVAGILC
NVADAPEEGC FHVPAVYRSG GVTIAVSSGG AAPARAAALR DAIAQWLGQS LNIEGHR
|
|---|
| |