Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0622 |
Symbol | |
ID | 5538085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 820924 |
End bp | 821904 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640892780 |
Product | terpene synthase metal-binding domain-containing protein |
Protein accession | YP_001430766 |
Protein GI | 156740637 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0581453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCAGG ACTATCGCGC ACGACTTGTC TACCCATTTT CCGGAGCGAT AAGCCCGCAT GCCGATATAG TCGATCAGGC AACGCTCGCC TGGGCGGCGA TGTTTGGCTT GTTGACGGAC TCATTGCGCC ACAAAAGTCG TCGCCTCCAG TATGGCTTGC TGGCTGCACG CGCCTATCCA CGAGCGGACC GTGAGATGTT GCAGATTGCC GCCGATTGGA TTGCATGGCT GTTCTTCATG GATGACCAAT GCGACGAAAC TGGCATTGGG CGTGATCTCC AACGCATGAT TGCGCTGCAC GAACGATTTC TTGCAATTCT TGACGGCGCA ACGCCGGAGG CGCATGATTG CGCGCTGACC TATGCGCTCG CCGATCTTCG TCGTCGACTG GCACTGCGCG CTCCTGATAA CTGGCTGCGC CGATTCAGCG AGCATGTGCG TCTCTACTTT ACTGCCAATC GCTGGGAAAC GGTCAACCGG CAGCGCGGTG CAACGCCGAA TGTGGCGACA TATTGCGCCG CGCGCCTGTT TTCGGGCGCC GTCTATGCAT GCTTCGATCT GATAGAACTG GCAGAGCAGA TCGAACTGCC GTTCTATGCC CGTCACCACA GCATTGTGCA GCAACTGGAG CAGGCTGCGA ACAATATCAT TTGCTGGTGC AATGATGTGC TGTCGTATCC CAAGGAAATG CAGCACGGCG ACCGGCACAA TCTGGTGCTG GTCATTCAGG GCGAGCATCA ATGCTCATTG CCCGAAGCCA TTGACCGCGC GCTCGACCTT CATGCGCGTG AAGTCGCTAC GTTTGTGCGG AAACGCACCT GTGTCCCATA TTTCGATGCA GCGGTCAATA CAGCGCTTGA AAAATATGTC ACCGGATTGC AGTTCTGGAT CTGCGCCAAT CGCGATTGGT CGCTGACGGC AACGCGCTAC GCGCCGACGC ACAAATCGCA GGAAATGGTG ATGGCAGTCG CGCAACAGTA A
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Protein sequence | MDQDYRARLV YPFSGAISPH ADIVDQATLA WAAMFGLLTD SLRHKSRRLQ YGLLAARAYP RADREMLQIA ADWIAWLFFM DDQCDETGIG RDLQRMIALH ERFLAILDGA TPEAHDCALT YALADLRRRL ALRAPDNWLR RFSEHVRLYF TANRWETVNR QRGATPNVAT YCAARLFSGA VYACFDLIEL AEQIELPFYA RHHSIVQQLE QAANNIICWC NDVLSYPKEM QHGDRHNLVL VIQGEHQCSL PEAIDRALDL HAREVATFVR KRTCVPYFDA AVNTALEKYV TGLQFWICAN RDWSLTATRY APTHKSQEMV MAVAQQ
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