| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0621 |
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| Symbol | |
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| ID | 5538084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 819773 |
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| End bp | 820906 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892779 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001430765 |
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| Protein GI | 156740636 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0312248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG ATATTATGCC CGAGTCGACA ATGCAGGCGC AGATGACCCG CCTGCGTCAG
TTTCTCTCCG CCTACATGCC GGTCGCATTC CTGTTCGGGG TTGTGTTTCT CGCGCTGGCG
TTGATCTTCC GCGACCTCGC AACCGGTATC AGCGGCGTGG CGATCATCGT GAACGGCGGT
ATTCTGCTCT ATGCGTTGCG CAGCGTGCGT CAGGGAAAGG TCCAGTCCGC TATTGTGGCG
ACAAGCGTCG GTTTGCTGGC AGGCGGGTTG GTCATTCTCC TGGCGCAACC ATTTCTCTTT
GCGACATTGA CGCTCTCGCC ACTACTGGTC GTGATTCTGG GGTTGCAGTA TTTGACCATC
CAGCCGCTCA AGCGCCTGAT CGCCGCCAGC GGACTGTGCA GCGTGATCGC TGTCAGTGTC
GGGCATCTGT TGCCGCAAGG CTTCATTGCC TCCACCCTGC CGGAATGGTT TCGCGATGTG
CTGCAAATCG GCGCAGCAAG CGCGGCGGTT GTGTTCGTGA TGATGCTGAT CTGGCACTTC
AGCGTACTCT TGAACGAGAT GCTCTCCTCG CTGCGCGTTG CCAACCGCGA ACTCGAAACG
CAGCAGACGA AACTGGTTCG CACCAATGAA CAGTTGCAGC AACAACTCGC CTCGGAGCGC
GAGTTGCTGA ACCTGGTCAG CGCACTGGAA ACGCCGGTCG TTTCGCTGGC TGAGGGCATT
CTGCTTGCGC CGATTGTTGG GCATATCGAC TCGCGCCGCG CCGACATCCT GCGGTCGCAT
TTGCTGGAAG TCGTCCACGC CAACCGCACC AGACTGATGA TCCTGGACAT CACCGGCGTC
ACCACCATCG ACACATCGGT GGCGCAGGCG TTGATGATGA CAATTCAGGC ATTGCGTCTC
CTTGGCTGCA AGGTGGTCGT CAGCGGCATT TCCGCTACGG TTGCAATGAC CCTGACACAC
CTGGGAGTCG ATCTGCACAA TGTCGAGACG GTGCGCAGTC CCGAAGAAGC CCTGGAGCGA
CTGGAGCGCG GTGAGCCGAT GTCCCATCTG CGGCAACCGT TGATGAATGG CGCCGAGATG
CGCGCCTTCC TGCCGGGGCT GATGAATGGC AATGGGGCGC ATCATAAGGC ATGA
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| Protein sequence | MTTDIMPEST MQAQMTRLRQ FLSAYMPVAF LFGVVFLALA LIFRDLATGI SGVAIIVNGG
ILLYALRSVR QGKVQSAIVA TSVGLLAGGL VILLAQPFLF ATLTLSPLLV VILGLQYLTI
QPLKRLIAAS GLCSVIAVSV GHLLPQGFIA STLPEWFRDV LQIGAASAAV VFVMMLIWHF
SVLLNEMLSS LRVANRELET QQTKLVRTNE QLQQQLASER ELLNLVSALE TPVVSLAEGI
LLAPIVGHID SRRADILRSH LLEVVHANRT RLMILDITGV TTIDTSVAQA LMMTIQALRL
LGCKVVVSGI SATVAMTLTH LGVDLHNVET VRSPEEALER LERGEPMSHL RQPLMNGAEM
RAFLPGLMNG NGAHHKA
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