| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0608 |
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| Symbol | |
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| ID | 5538071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 807243 |
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| End bp | 808280 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892769 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001430755 |
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| Protein GI | 156740626 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000789537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.2607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAACA GTGACCTTTC TCCCATCCAT CAACGTCCAC GTATCTGGAC TGACATTCGC
CTGTTGCCGG AAGCAGCAGC GTTGCTGGAA GCGCACGCTG AGGTTGCGGC AGGTGGCGAT
CCTGCAACTT TACCCGGCAG CGCAGCAGCA ATCATCAGCG CGATGATCAA CGCCGATGGC
GCATGGATGG ACCGGGCCGG ACCCACACTG ATGGCCATTG CTCGCCCTGG CATCGGTGTG
GACAACATCG ACCTTGCAGC CGCAACCGAA CGCGGCATTC TAGTAATCAA CACCCCCGAC
GGTCCAACCG AGAGCACGGC GGAGCATGCC GTCGCACTGG TACTGGCGCT GGCAAAGCAG
GTCGTTGCTG CCGACCATCG TTTCCGCACC GCAGGATGGA GCGCCGCGCG ATTGCGTGGC
GTCGAGGTGC GCGGCAAAAC GCTGGGAGTC GTCGGTCTGG GGCGCATTGG GCGGCGCGTG
GCGCAGATCT GCCGCCAGGG TCTGGGGATG CGCGTGGCGG CATACGACCC GCTCGCGCCT
GCTGAAGCGT TTGCAGCGCT GGATGTTGTG CATGTAGAAA CGCTCGACAA TCTTCTGCCG
CAATCAGAGT TTCTGACGCT GCATTGTGCG CTCACCCCGT CAACGCGCGG TCTGATCGGC
GCGCGTGAAC TGGCGCTACT GCCAAAGGGC GCATTTCTGA TCAACGTCAG TCGTGGTGCG
GTCATCGATC AGGCGGCGCT GATCGACGCG CTCACCACCG GACACCTGGC AGGCGCCGGT
CTTGATGTCT TCGACCCGGA GCCGCTTCCC AATGACCACC CACTCCTACA ATTTCCACAC
GTTATCCTCA CGCCGCACAT CGCATCGTTT ACGGACGATG GCGTGCGGGT GATGCACCAT
GGCGCAGTAG CGCAAATCGT TCGTCTCCTG CGCGGCGAAC ATCCGCCGCA CATTGTCAAT
CCCGAAGCCC TGCCCGGGCG TAGAGCGAAG ATGAACCATG GAACGCAACC CGATGCCCTT
CCAACTGATC GCCCTTGA
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| Protein sequence | MHNSDLSPIH QRPRIWTDIR LLPEAAALLE AHAEVAAGGD PATLPGSAAA IISAMINADG
AWMDRAGPTL MAIARPGIGV DNIDLAAATE RGILVINTPD GPTESTAEHA VALVLALAKQ
VVAADHRFRT AGWSAARLRG VEVRGKTLGV VGLGRIGRRV AQICRQGLGM RVAAYDPLAP
AEAFAALDVV HVETLDNLLP QSEFLTLHCA LTPSTRGLIG ARELALLPKG AFLINVSRGA
VIDQAALIDA LTTGHLAGAG LDVFDPEPLP NDHPLLQFPH VILTPHIASF TDDGVRVMHH
GAVAQIVRLL RGEHPPHIVN PEALPGRRAK MNHGTQPDAL PTDRP
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