Gene Rcas_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0605 
Symbol 
ID5538068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp805694 
End bp806053 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content65% 
IMG OID640892766 
Producthypothetical protein 
Protein accessionYP_001430752 
Protein GI156740623 
COG category[S] Function unknown 
COG ID[COG1302] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000130603 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.454931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCG TGAACAACCA CACCGCCATC GGCAAACCCG CAGGTCGCGT TCTGATCGCG 
CCGCGCGCCA TCGCGTCCAT TGCCGCTGCC GCAGCGCTGC AAACCGATGG CGTCGCCGGA
CTGACCGATC CACAGGGTCC GCCGTTTGTT CTTCCGCCGG GCGAAGCGCG CCGCGGCGTT
GACGTGCATG TGCATCAGAA CGATCTCGCC GTCGATGTCC ACCTGATCGT CCAGACCGGC
AGATCCATCG CCGATGTGGC GCGCGCCGCA CAATCTGCCG TGCGCGCCGC GCTGTCGTTT
ACGCTCGACC TTCCTGAACC GACGGTCAAT ATTCGTGTGC AAGGGGTGGG AGGTCGATGA
 
Protein sequence
MNTVNNHTAI GKPAGRVLIA PRAIASIAAA AALQTDGVAG LTDPQGPPFV LPPGEARRGV 
DVHVHQNDLA VDVHLIVQTG RSIADVARAA QSAVRAALSF TLDLPEPTVN IRVQGVGGR