| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0601 |
|---|
| Symbol | |
|---|
| ID | 5538064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 799871 |
|---|
| End bp | 802399 |
|---|
| Gene Length | 2529 bp |
|---|
| Protein Length | 842 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640892762 |
|---|
| Product | ATP-dependent DNA helicase RecG |
|---|
| Protein accession | YP_001430748 |
|---|
| Protein GI | 156740619 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1200] RecG-like helicase |
|---|
| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGCA AAGACCAGAT CATTCGCCTG GGCAAACTGC TGGCGGAGGA ACAACGTCGC
GGCTGTGATG ATCGCGCCGT GAATGGCGGT CTGGAGCGCT TTCTGACCGC CTGGAGGATG
GACGCCGGCA TGGCGTTGCG CTACGAAGCC GTGCAACAGG CGCTCGAATT GCTCGCCGGA
TACGCTGTGC TCGATCAAGC GACTCGCCGC GCGCGCGTCG GCATTGCGCT CGAAAGTCTG
CGCTCGCTGT TCCGCGCCCA ACCGAACCCG CAGCCTGCAC CGGTTGCGTC GTCAGCGATG
CCGACGCGCG CGCCAACCCG GCGCGCCTCC CGCCCTGATG CTCCGGCGCG TCCACTGACT
CCGGACTCGC CGCTCGACGA CGTGCCGGGC ATCACACGCC AGATGGTGCA GTCGTTCCGG
CGCCTCGGCG TTCGTACCGT GCGCGATCTG CTCTACCACT TCCCCCATCG CTACGATGAT
TTCACCTCAC GCAAAACAAT CGCCGAATTG CAACCAGGCG CCGTCGAGAC GGTCATCGCC
GAAGTGCTCG ATGCGCGCAC ACTGCCAATG AAAAGCGGAG GTTCACGGCT CGATGTGCTG
GTCGGTGACG AAACCGGCAC GCTTAAGGTG GTCTTTTTTC GGCAACCCTG GCTGGCGCAG
CGCTTTCTGG TCGGCACGAA GGTCGTGTTG AGCGGGAAGA TCGGAGTCTA CGATGGCTTG
CGCCAGATGG CGTCGCCCGA ATGGCAACCC TTCACCGATG ACGACCTGAT CCACGTCGGG
CGTCTGGTGC CGGTGCATCC CCTGACCCGC GGGCTGGTCG AGCGCAGTGC GCGCGCGCTG
ATCAAACAGG TAGTGGATCG TTGCGCGCCG ATGCTGGAAG ATCATCTGCC CCCCGCAGTG
CGCGAACGCA CGGGGTTGAT GCCGCTGCCG CAGGCGATTG CTCAGATCCA CTTCCCTGAC
AGCCGCGATA TGCTTGAACA AGCGCGCCGG CGCCTTGGCT TCGACGAGTT TTTGTTCATT
CAACTTGGCG TGCTGCAACG CAAGATGATC TGGCAGGCGC AGCGCGGTTA TGCTATCACC
CGCCGCGACG ATGTGCACGA AGCATTTCTC AGACGGTTGC CGTTTGAACT GACCGGCGCT
CAGGTGCGCG CCATCGAGGA AATCTTCGCC GATATGGCGC GCCCTGTGCC GATGGCGCGG
CTTCTCCAGG GCGATGTCGG CAGCGGTAAA ACGGTCGTTG CGGCGGCAGC GGCGCTTCAG
GCGATAGCAT CCGGCTATCA GGCGGCGCTC ATGGCGCCGA CCGAAATCCT GGCAGAACAG
CATTATCGCG GCTTGCGCGC GCTCCTCGGC AACGTACCGG TTCCGCGTGA TCAACGCCAG
GTTTCAGCAG AAGACGATCT CGACCCCGAA CAACGTGAGC GCCTGGAAGA GATCAAACGT
ATTCTCGGCA TGAGCGGCGA TGATGACCTC GACGGGCGCG GCGTGCGGGT AGCGCTGCTC
ACCGGCAGCC TCGGCGCGAA AGAGCGGCGT CGCGTGCTCG AAGGGATCGC GCGCGGCGAC
ATCGATCTGA TCGTCGGCAC CCACGCGCTG ATTACCGAAA GTGTGCAGTA CGCTGCGCTT
GGTCTCGCAA TCGTCGATGA ACAGCATCGC TTCGGCGTCG AACAACGGCA ACGCCTGAAA
GATAAAGGAT ACAACCCGCA TATGCTGGTG ATGACGGCGA CCCCGATCCC GCGCACGCTG
ACGCTGACGA TCTACGGAGA CCTGGATGTG TCGGTGCTCG ACGAGTTGCC GCCGGGGCGC
CAGGAGATCA AGACGCGCTG GATTACGACG GTCGAGCGCG ACAAAGCCTA TCGCCATATC
CGGCGCGAAG TCGCCAAGGG GCGGCAGGCA TTCGTCATCT GCCCACTGGT CGAAGAGAGC
GAAAAGGTCG ATCTCCCTTC CGCCGAAGAA ATGCACGCTA CGCTGTCACG TGATGTCTTT
CCCGATCTGC GGGTGGCGCT GATCCACGGC AAAATGCTGC CGCGCGAGAA GGACGCCGTT
ATGATCGCCT TCCGCAATCA CGAATACGAT ATTCTGGTCG CCACTGCCGT CATCGAGGTC
GGCATCGATG TTCCCAACGC AACGACGATC CTGATCGAAG GAGCGGAGCG GTTCGGTCTG
GCGCAGTTGC ATCAGTTTCG TGGGCGAGTC GGGCGCGGGG TGCATCAGAG TTATTGCATC
CTCGTCTGTG ACAAAGAGCA GAATGAAGTG ACGCGCCAGC GCATGGAGGC AATGGAGACG
ATCAGCGATG GCTTCCGCCT GGCGGAGATT GATCTGCACC TGCGCGGACC CGGCGAGTTC
TTCGGCACCC GGCAGAGTGG CACCCCCGAC CTCAAAGTGG CGCAGTTGAC CGATGTGCGC
CTGCTCCAGA CGGCATACCG CGAGGCGCAG AAGATTCTGG CGGACGACCC ACAACTCGAA
CGACCTGACC ACGCTCTGTT GCGCGCAAAG ATGGACGCCT TCTGGGTCGA GACCTTGCAG
GCGGGCTAG
|
|---|
| Protein sequence | MDGKDQIIRL GKLLAEEQRR GCDDRAVNGG LERFLTAWRM DAGMALRYEA VQQALELLAG
YAVLDQATRR ARVGIALESL RSLFRAQPNP QPAPVASSAM PTRAPTRRAS RPDAPARPLT
PDSPLDDVPG ITRQMVQSFR RLGVRTVRDL LYHFPHRYDD FTSRKTIAEL QPGAVETVIA
EVLDARTLPM KSGGSRLDVL VGDETGTLKV VFFRQPWLAQ RFLVGTKVVL SGKIGVYDGL
RQMASPEWQP FTDDDLIHVG RLVPVHPLTR GLVERSARAL IKQVVDRCAP MLEDHLPPAV
RERTGLMPLP QAIAQIHFPD SRDMLEQARR RLGFDEFLFI QLGVLQRKMI WQAQRGYAIT
RRDDVHEAFL RRLPFELTGA QVRAIEEIFA DMARPVPMAR LLQGDVGSGK TVVAAAAALQ
AIASGYQAAL MAPTEILAEQ HYRGLRALLG NVPVPRDQRQ VSAEDDLDPE QRERLEEIKR
ILGMSGDDDL DGRGVRVALL TGSLGAKERR RVLEGIARGD IDLIVGTHAL ITESVQYAAL
GLAIVDEQHR FGVEQRQRLK DKGYNPHMLV MTATPIPRTL TLTIYGDLDV SVLDELPPGR
QEIKTRWITT VERDKAYRHI RREVAKGRQA FVICPLVEES EKVDLPSAEE MHATLSRDVF
PDLRVALIHG KMLPREKDAV MIAFRNHEYD ILVATAVIEV GIDVPNATTI LIEGAERFGL
AQLHQFRGRV GRGVHQSYCI LVCDKEQNEV TRQRMEAMET ISDGFRLAEI DLHLRGPGEF
FGTRQSGTPD LKVAQLTDVR LLQTAYREAQ KILADDPQLE RPDHALLRAK MDAFWVETLQ
AG
|
|---|
| |