| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0556 |
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| Symbol | |
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| ID | 5538019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 742405 |
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| End bp | 743223 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892718 |
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| Product | hemolysin A |
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| Protein accession | YP_001430704 |
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| Protein GI | 156740575 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1189] Predicted rRNA methylase |
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| TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAAAGA AAGTACGGCT CGATCAGTTG CTGGTGCAAC GTGGTCTGGC GGAGACGCGC
GCCCGCGCAC AGGCGCTGAT CCTGGCCGGC GAGGTGCGGG TCAACGGCGT CACCCGACAC
AAAGGAGGCG AACTCGTCCC CGATGATGCC GAGATTGAGG TAATCGGCGC ACTGCCGTAT
GTCAGTCGCG GCGGCTATAA ACTGGCGCAC GCGCTCGACA CCTTTGCGCT TTCCCCCGCA
AATCTGGTAG CGCTCGACAT TGGCGCATCG ACCGGCGGCT TCACCGATGT GCTGCTGCAA
CGCGGCGCTG CCCGCGTCTA TGCCGTCGAT GTCGGGTATG GACTGATCGA CTGGCGATTG
CGCCAGGACC CGCGGGTCGT TGTTCTCGAG CGCACCAATA TTCGCTACCT GGAAGTGTTG
CCTTCGCCGG AAGAGGAGGC GTTGGCTGCT CCGGTTCTCG CCGATTGCGC CGTGATCGAT
GTGTCGTTCA TCTCGCTCAA GCTGGTTCTT CCCGCAGTTC AGCGCCTGCT GCAACCGAAT
GCATGGATGA TTGCGCTGAT CAAACCGCAG TTCGAGGCGG GACCGGCGCA GGTCGGGAAA
GGCGGCGTGG TGCGCGATCC GGCGGTTCAC GCGGCAGTAG TGCGCGACGT GCTGACCTTC
GCTGCCACTA TCGGGCTGTC GCCCCACGGT CTCACCCGCT CGCCGATCAC TGGACCAGCC
GGAAATGTCG AGTTTCTGGC GTGGCTCGGC GGTCCTGGAC CGGTGCTCAA TGTGGGGTGG
GCAATTGAAG AGGCGGTGAG GAAGACGTCT GCCAATTGA
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| Protein sequence | MAKKVRLDQL LVQRGLAETR ARAQALILAG EVRVNGVTRH KGGELVPDDA EIEVIGALPY
VSRGGYKLAH ALDTFALSPA NLVALDIGAS TGGFTDVLLQ RGAARVYAVD VGYGLIDWRL
RQDPRVVVLE RTNIRYLEVL PSPEEEALAA PVLADCAVID VSFISLKLVL PAVQRLLQPN
AWMIALIKPQ FEAGPAQVGK GGVVRDPAVH AAVVRDVLTF AATIGLSPHG LTRSPITGPA
GNVEFLAWLG GPGPVLNVGW AIEEAVRKTS AN
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