| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0553 |
|---|
| Symbol | |
|---|
| ID | 5538016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 734829 |
|---|
| End bp | 735470 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640892715 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001430701 |
|---|
| Protein GI | 156740572 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGC TGCTTCGACC TCCAGCCACA CTGACGCTCA CGCTTCCGCT TGTTGCGGCG
GAGCCGATCA TCGTGCCCCG GCCCGGTCGT CCGTGGACGG TCGCCGACCT GCAACAGTTC
GCCGGGCGAG AAGAACGCTA TGAACTTGTG CGAGGAGATC TGTTGATGAT GAGTTCGGCA
AGTCCGAAGC AGGGACGCTA CGCCATGCGG CTGGGAAGCG CACTCCAACA ATATGTCGAG
GCGCACGATC TGGGCGAAGT CTACACGGCT GAGCCGGGGT TTCAACTTCA GCCCGAACCG
GATGCGGTCG TGCGCGCGCC GGATGTTGCA TTTGTGCAGA AAGAACGCAT TCCGCCGCCG
GAGGACGAGA GCGGATTCTG GTCGCTTGCT CCAGACCTGG TTGTAGAGAT CATTTCGCCC
TTCGAGACAG CCGTGCAGGT GCAGGCGAAG GTGCAAGACT ATCTGACTGC CGGATCGCGC
CTTATCTGGC TGGTCTACCC CGAGACGCAC ACCGTTGTCG AGTATCGCGC CGCCGGCGCG
ATGCGCCTGT ACGCGAGCGC CGACACCCTC GACGGCGCTG ACGTTGTTCC AGGTTTTCAG
TACCCGCTCG CGCAACTGTT CCGTGAGACG CGGCGGATGT GA
|
|---|
| Protein sequence | MNTLLRPPAT LTLTLPLVAA EPIIVPRPGR PWTVADLQQF AGREERYELV RGDLLMMSSA
SPKQGRYAMR LGSALQQYVE AHDLGEVYTA EPGFQLQPEP DAVVRAPDVA FVQKERIPPP
EDESGFWSLA PDLVVEIISP FETAVQVQAK VQDYLTAGSR LIWLVYPETH TVVEYRAAGA
MRLYASADTL DGADVVPGFQ YPLAQLFRET RRM
|
|---|
| |