Gene Rcas_0551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0551 
Symbol 
ID5538014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp731981 
End bp733348 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content65% 
IMG OID640892713 
Productphosphoribosylamine--glycine ligase 
Protein accessionYP_001430699 
Protein GI156740570 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0151] Phosphoribosylamine-glycine ligase 
TIGRFAM ID[TIGR00877] phosphoribosylamine--glycine ligase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTC TGTTGCTTGG CGACGACGGA CGCGCCCACG CGCTCGCCTG GAAACTGATC 
AACAGCCCGC GGTCACCGGA GGTGATCTGC GCGCCGGGCA ACGGCGGAAC AGCGCCGTTC
GCGCCTTCGG TGACGCTCGA TGTCGCCGAT GTGGCAGGGT TGAGCCGCTG GACGTTCGAG
GAACAGATCG ATCTGGTGAT TCCTGCGACC AGCGCACCCC TGCATGCCGG GCTGGTCGAT
GAGGTGCTGT CGCTGCACAT TGGCGTCTGG GGTGCGTCGC GCCGCGCCGC CGCGCTGGAG
CGCAGTCGCT GCCTGGCAAA GGAATTCATG ATTCGCCATG GTATTCCGAC AGCGCCAGGG
CGCCCGTTTA TCGACCTTGC CATGGCGGAG CGTTATCTGG CGACGTTGAC CTTGCCGGTG
ATGATCAAGA CGGATCATCC ATCGGGCGGC GAGGAAATTT TCGACGACCG GTACGCTGCG
CTCGAAGGGT TGCGGCGCCT GTTTGCCGCG CGTTCCCTCG ACGGCGGCGA GGGGGTGGTC
ATCGAAGCCG TGCTGCGCGG TCCGCGGGTG GCGCTCTCGG CGCTTACCGA TGGGCGTACC
GTCGTGCCGC TCCTGGCGAC CCGCCTGTAT GATCGGGTCG AGGAAGGGGA TCGCGGTGCG
CAGGCGCGTG GCGTCGGGGC GCACACCGGC AATTCGGCAT TCGCACAGCG TCTGACGCGC
TACCTGCACG AGAAGTTCAT CCTGCCGTTC GTCGCCGGTC TGGAGAAGGA AGGGTTGCCG
TGCTGGGGAT TGATCGGCGT GGATTGCATC ATTACGACGG AGGGTCCGCG CGCGACGGCG
TTGCGCTTCA GTTTCCGCGA AGGAGAGGCG CAGGTGGTGT TGCCGCGCCT GGAAGATGAC
CTGATCCCCT GGCTGGAAGC CTCGATCACC AGGCGTCTCC ACGAATTGCC GCCGCCGACA
TGGTCGGCGA CCGCCAGCGT TGGTCTTGGA TTGATGGCGC GTGGATATCC CAATTTCTTC
CCCACCGGCG GGCAGATCCG CGGTCTCGAG GAAATCGACC CCGGCGTGAT GCTCTTTCAT
AGCGCAACGA CCAATCCCGC TGCAACGGCG CCATACGCAT CGCGCCTGGC GAGCAATCGC
AGTCGTAGCG CCGACGCCCT CAGTTCAATG ATCGGCGGAT TGCTCGGCAT GGGAGGCGCT
CCACAGAGTT GGGGCGGGTT GCGTACCACC GGCGGTCTGG TTGCCACGGT TGTGGCGCAG
GGGGTCTCAC TGCCCGGCGC TCGCGGTCGC GCGCTGGTCA ACGCCGATCG GGTGCAGTTC
GAGGGGCGCA CCTACCGCAG TGATATTGGT GAGCGTGACT TTGGCTGA
 
Protein sequence
MKILLLGDDG RAHALAWKLI NSPRSPEVIC APGNGGTAPF APSVTLDVAD VAGLSRWTFE 
EQIDLVIPAT SAPLHAGLVD EVLSLHIGVW GASRRAAALE RSRCLAKEFM IRHGIPTAPG
RPFIDLAMAE RYLATLTLPV MIKTDHPSGG EEIFDDRYAA LEGLRRLFAA RSLDGGEGVV
IEAVLRGPRV ALSALTDGRT VVPLLATRLY DRVEEGDRGA QARGVGAHTG NSAFAQRLTR
YLHEKFILPF VAGLEKEGLP CWGLIGVDCI ITTEGPRATA LRFSFREGEA QVVLPRLEDD
LIPWLEASIT RRLHELPPPT WSATASVGLG LMARGYPNFF PTGGQIRGLE EIDPGVMLFH
SATTNPAATA PYASRLASNR SRSADALSSM IGGLLGMGGA PQSWGGLRTT GGLVATVVAQ
GVSLPGARGR ALVNADRVQF EGRTYRSDIG ERDFG