| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0549 |
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| Symbol | |
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| ID | 5538012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 729492 |
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| End bp | 730361 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892711 |
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| Product | apurinic endonuclease Apn1 |
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| Protein accession | YP_001430697 |
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| Protein GI | 156740568 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAGC GACGTTTCGG CGCGCATATG TCTATCAGCG GCGGGTTGTA CACCGCATGC
GAACGCGGAC GCCGCGCAGG GTGCGACGTC GTTCAGATTT TCAGCAAGAA TCAGCAGCAA
TGGCGCGCCC GACCGCTGAC CGACGATGAG ATTGCGCGTT TCAAGGAAGC GCAGATCACC
GAAGGCGTGC CGGTTGTTCT GGTTCACGAC TCGTACCTGA TCAATCTGGC AGCACCGGGC
GATGAGTTGT GGCACAAATC GCTCGAGGCG TTCCGCGAGG AACTGGAACG CTGCGCTTTG
CTCGGCGTTC CGTACCTGGT CACACATCCC GGCGCACACG TCGGATCGGG CGAAGAAGCG
GGGATGCGCC GCGTTGCGGC TGCCCTCGAC CGCGTGTTCG AGAGCGGCGC CGGTGACGGG
GTCACGGTCC TGCTGGAAAC GACCGCCGGG CAGGGGAGCA GCCTGGGACG CCGCTTCGAG
GAACTGGCGC GCATTATCGA GTATTCCCGC TACCCGAACC GCCTCGGCGT CTGTGTCGAT
ACCTGTCACA TCTTTGCCGC CGGGTACGAC ATTCGCACGC CGGAACAGTA TGCGGCGACG
ATTGAAGAAC TGGATCGCGT CATCGGCATC GCGCGTGTGA AAGCCTTTCA TATGAACGAC
TCGCAGAAAG AGCTGGGGAG CCGGGTGGAC CGCCATACGC ACATTGGCGA GGGATGCATC
GGACTGGAGG GGTTTCGCGC ACTGGTGAAT GATGAGCGCT TTGCCGATCT GCCGATGGTG
CTGGAAACGC CAAAAGGCGA CGACCTCGCC GAGGATGTTC GGAACCTGAA GACTCTGCGT
GGTCTGAGGG CTGATACCAA TTACCGGTGA
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| Protein sequence | MQQRRFGAHM SISGGLYTAC ERGRRAGCDV VQIFSKNQQQ WRARPLTDDE IARFKEAQIT
EGVPVVLVHD SYLINLAAPG DELWHKSLEA FREELERCAL LGVPYLVTHP GAHVGSGEEA
GMRRVAAALD RVFESGAGDG VTVLLETTAG QGSSLGRRFE ELARIIEYSR YPNRLGVCVD
TCHIFAAGYD IRTPEQYAAT IEELDRVIGI ARVKAFHMND SQKELGSRVD RHTHIGEGCI
GLEGFRALVN DERFADLPMV LETPKGDDLA EDVRNLKTLR GLRADTNYR
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