| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0543 |
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| Symbol | |
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| ID | 5538006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 722278 |
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| End bp | 723336 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640892705 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001430691 |
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| Protein GI | 156740562 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGCG GGACGTTCCA CACGTCGTAT GCCGGTGATA TGGCGTTGCG CCCATATTGG
GTTCAGCGAT TGCGAATTGC GCTGGTGCTT ATCGCCGTCC TGACCTTTCC ATGGTTCGCA
GACCGCTATT GGCTGAACCT GGCGAATACG ATTGCGATCG CTGCTATCGG CGCAATTGGC
TTGAACATTC TGGTGGGTTA TACCGGTCAG ATCAGCATCG GTCACGGCGG CTTCCTGGCG
GTCGGCGCCT ATACCGCCGG TCTGCTCGCG GCGCGACTCG ATGCGCCGAT GTGGGTTACC
ATTCCGGTCG CCAGTGGCTT TACGGCGCTG GTGGGCGCGT TCTTCGGGTT GCCGTCGGTG
CGGCTCAAGG GTCTCTACCT GGCGATTGCC ACGCTGGCGG CGCAGGAGAT TATTATCTGG
CTGCTGACGC ACGGCAAACT GCTCGGCATC GGCGAGTCGC TGACCTTGCC GCAGGCGGCG
AACAATCTCT TTGGCTTCCC GCTATCGGCG CTGGGCAACA ACGATTTTGC GTTCTACTGG
GTGACGGTCG GATTTCTCAT CCTTACCGTC GTGTTTGTGA GTAACCTCTT CCGTAGCCGA
ACCGGACGCG CATTCGTGGC AATTCGTGAC CAGGATATTG CTGCACAGGT CATCGGCGTT
GATCTCTTTC GTTATAAGTT GCTGGCGTTT GCCACATCGT CGTTCTTCGC GGGGCTGGCG
GGCGCGCTGA CGGCGCACTA CCGCAGCATT ATTTCGTGGG AACGCTTCAC GATTGACACG
AGCATCCTTT ACCTGGCAAT GATTATTATC GGCGGTCTGG GGAGCGTTTC GGGGTCGATC
TACGGTGCGG CGTTCATGAC GCTGCTGCCG GCGCTGCTCT CGAACCTGGC GCGCGCGATC
AGCGGTGTTG TGCCGGATAT CAACACCTAT CTGCCGTATA TTCAGCAAGG CGCATTCGGA
CTGGCTATCG TGCTCTTTCT GATCTTCGAA CCAGAAGGGA TTGTCAAAAT GTGGCGCAAC
GTCAAGGATT ACTTCCGGTT ATGGCCGTTC AGTTATTAG
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| Protein sequence | MQSGTFHTSY AGDMALRPYW VQRLRIALVL IAVLTFPWFA DRYWLNLANT IAIAAIGAIG
LNILVGYTGQ ISIGHGGFLA VGAYTAGLLA ARLDAPMWVT IPVASGFTAL VGAFFGLPSV
RLKGLYLAIA TLAAQEIIIW LLTHGKLLGI GESLTLPQAA NNLFGFPLSA LGNNDFAFYW
VTVGFLILTV VFVSNLFRSR TGRAFVAIRD QDIAAQVIGV DLFRYKLLAF ATSSFFAGLA
GALTAHYRSI ISWERFTIDT SILYLAMIII GGLGSVSGSI YGAAFMTLLP ALLSNLARAI
SGVVPDINTY LPYIQQGAFG LAIVLFLIFE PEGIVKMWRN VKDYFRLWPF SY
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