| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0515 |
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| Symbol | |
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| ID | 5537978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 670020 |
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| End bp | 670928 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640892677 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001430663 |
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| Protein GI | 156740534 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAC AAACGACATC ATCCGGCGTG CGCCCGGCGA CTCCTTTCGT GCGGCGCGGT
CTTTGGGCGA GTAAGCGACG ACGCGAGCAG ATTGTGACGA TCATTTCGAC GATCATTGTG
GCGCTTGGGT TGATCATTAT TCTGTTTCCG CTGGTGTGGA TGTTTTCCAC ATCGTTGAAA
ACGCGCGCAG AAGTGGCAAA GTTCCCGCCG GTCTGGATTC CGTCCGTGCC GCAGTGGGAC
AACTATCGGG TGGCGCTGAC CGGTGAGAAC CGCTTCGATA TCTACTTCAA GAACACGCTA
ATCTATGCTG GCGGCGCGGC ATTAGGCGAA ACCCTCTCGT GTGCGTTGGT GGCGTATGGC
TTTGCGCGGT TGCGGGCGCC TGGCAAGAAT GCGCTATTCG TGCTGGTGCT CGCTACGATG
ATGTTGCCTT TCTGGGTGAC GCTGATCCCG CAGTATATCA TTTTTGCCCG CCTGGGATGG
ATCGATACCT ATCTCCCGCT GCTTGTGCCG AAATTCTTCG GTAGCGCCTA TCTCATTTTC
CTGCTCCGCC AGTTCTATAA GACGCTGCCA AAGGATTATG AGGAAGCGGC ATTGATCGAT
GGCGCGGGAT ACTTCGGTAT CTGGTGGCGC ATTATTGTGC CATTGTCGCT GCCAGCGGTC
GGTGCAGTCG CCATTATGAG CTTCATGTTC CACTATCAGG ACTTCATGGG TCCGCTGCTC
TACATCAATT CGCAGTACAA CTATCCGGTT GCGATTGGCT TGCAACAGTT CCGCGCCCCA
TTCGGCGGTA CAGCGTTCCA TCTGCTTATG GCGGCGTCAC TGGTCACACT GATTCCGCCT
ATGGTGCTCT TCTTCCTGGC GCAACGTTAT TTCATTCAGG GCATTGTGGT CACCGGCGTG
AAGGGGTAA
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| Protein sequence | MATQTTSSGV RPATPFVRRG LWASKRRREQ IVTIISTIIV ALGLIIILFP LVWMFSTSLK
TRAEVAKFPP VWIPSVPQWD NYRVALTGEN RFDIYFKNTL IYAGGAALGE TLSCALVAYG
FARLRAPGKN ALFVLVLATM MLPFWVTLIP QYIIFARLGW IDTYLPLLVP KFFGSAYLIF
LLRQFYKTLP KDYEEAALID GAGYFGIWWR IIVPLSLPAV GAVAIMSFMF HYQDFMGPLL
YINSQYNYPV AIGLQQFRAP FGGTAFHLLM AASLVTLIPP MVLFFLAQRY FIQGIVVTGV
KG
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