Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0489 |
Symbol | |
ID | 5537952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 630340 |
End bp | 632340 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640892651 |
Product | asparagine synthase (glutamine-hydrolyzing) |
Protein accession | YP_001430637 |
Protein GI | 156740508 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTGGAA TTGTGGGCAT CGTCAACGTT CAGGGTGATC ACCCGATTAC CGAAGAAATG CTGCGCCAGA TGCTGGCGTT GATCCGGCAC CGCGGTCCTG ATCAGTTTGG CATCTATCTC GACGACCGTG CCGGGTTGGG CAATGCGCGA CTGAGCATCA TCGATCTGAG CGGCGGTCAG CAACCGATTG CCAGCGAAGA TGAGGGTCTC TGGATCGTCT TCAACGGCGA AATCTTCAAC TATGTGGAAC TGCGTCCCGA TCTCGAGGCG CGCGGGCACC GCTTCACGAC CAATACCGAT ACCGAGGTGA TTCTGCACCT GTATGAAGAG TACGGTCCGG CATGCCTTTC CCATCTCAAC GGGCAGTTTG CGATCGCCAT CTGGGACGCG CACGAACAGA CACTCTTCCT GGCGCGCGAC CGGGTCGGCA TCCTCCCACT GTTCTATACC ATCGTCGATG GCACGTTGAT CTTCGCGTCG GAGATCAAGG CAATCATCGC TGATCCGCGC GTGCAACGCG CCATCGACCC CGTGGCGCTG GAGCAGATTT TCACGTTCTG GGGAACGCTC TCGCCGCGGA CCATTTTTCG TGGCATCGTG GATCTGCCTC CAGGTCATTA CCTGATTGCG CGACGCGGGC GGATCGATGT TCAACCGTAC TGGCGGCTGG AGTTCGGCGC GCCAACCGAA GCGCGCCGCG AGGAGGAATA TGTCGAGGAG TTGCGCGATC TCCTGATCGA CGCCACAACG ATCCGTCTGC GCGCGGATGT GCCGGTCGGG GCATACCTCA GCGGCGGACT GGACTCCTCG ACAGTTGCAG CAATTGTGCG CCAGTACGCA GATAATCGCC TCGATACCTT TTCGATTGCC TTCAGCGACC CGGAGTTCGA TGAAAGTCGC TTCCAGCGCC AGATGGCGCA GTGCCTTGGC ACGAACCATC AGGTAGCGTA TGTGACGCAC GCCGATATTG GGCGCGTCTT CCCGGAGGTG ATCTGGCACA CGGAAACGCC AATCCTGCGC ACATCGCCGG CGCCGCTCTT CATTCTCTCG CAACTGGTGC GCGACCATTC CTACCGTGTG GTGCTGACCG GCGAAGGCGC CGATGAATTT CTGGCAGGCT ACGACATTTT CAAAGAAGCG AAGGTGCGGC GGTTTTGGGC GCGTCAGCCG TCTTCGCGCC TGCGACCGTT GCTATTGCGG CGCCTGTATC CCTGGATCGC CGGGTTTGCC GGCAAGAATG TCGCCTATCT GGCGGCGTTC TTCAGTGAAG GATTGATGGA TACGACCGCG CCAGACTACT CACACCGTCC GCGCTGGCGC ACCACCAGCC GCACCCGCCG ATTCTTCAGC GACGACGTGC GTCAGGCCGC CGATACGCTG GCGCAATCCA CGGATCGCGC GCCATACTAC CCGGAAGCGT TCAGTTCGTG GGATCCGCTC CAGCAGGCGC AGTATCTGGA GATCACCACG TTCCTTTCGC AATACCTCCT CTCTGCCCAG GGAGACCGGA TGATTATGGC GCACGCGGTT GAGGGGCGCT TTCCCTTCCT CGATCATCGT GTCATCGAAT TTGCCAGTCG CCTGCCACCG TGCCTGAAAC TGCGCGGTCT CACCGAGAAG TACATCCTGC GCCGGGTCGG TCGTGCCTGG CTGCCAGACG CCATCTGGCA GCGTCCCAAG CAACCGTACC GCGCGCCGAT CCATCGCAGT TTCTTCAACG ATGCGCGCCT GGACTATGTT CAGCATCTCC TCTCGCCGGA TCAGGTCCAG GCGAACGGTC TGTTCAAACC GACGGCGGTG GCGCACCTGA AGGAGAAAGC ACAGTCCGGC GTCCGCTTGA GTGAAACCGA AGACATGGCG CTGGTGGGGA TTCTCTCGAC CCAACTGCTG GTCGAGCGGT TCATTCACGA ATTTCGTTTA CCGCCGCCAA TCTCCGAAGC AGACAGTGTC AGAGTCTGCA TTAGAAACGG CATCACCGTG GGAGGAACTT ATGGGATTTG A
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Protein sequence | MCGIVGIVNV QGDHPITEEM LRQMLALIRH RGPDQFGIYL DDRAGLGNAR LSIIDLSGGQ QPIASEDEGL WIVFNGEIFN YVELRPDLEA RGHRFTTNTD TEVILHLYEE YGPACLSHLN GQFAIAIWDA HEQTLFLARD RVGILPLFYT IVDGTLIFAS EIKAIIADPR VQRAIDPVAL EQIFTFWGTL SPRTIFRGIV DLPPGHYLIA RRGRIDVQPY WRLEFGAPTE ARREEEYVEE LRDLLIDATT IRLRADVPVG AYLSGGLDSS TVAAIVRQYA DNRLDTFSIA FSDPEFDESR FQRQMAQCLG TNHQVAYVTH ADIGRVFPEV IWHTETPILR TSPAPLFILS QLVRDHSYRV VLTGEGADEF LAGYDIFKEA KVRRFWARQP SSRLRPLLLR RLYPWIAGFA GKNVAYLAAF FSEGLMDTTA PDYSHRPRWR TTSRTRRFFS DDVRQAADTL AQSTDRAPYY PEAFSSWDPL QQAQYLEITT FLSQYLLSAQ GDRMIMAHAV EGRFPFLDHR VIEFASRLPP CLKLRGLTEK YILRRVGRAW LPDAIWQRPK QPYRAPIHRS FFNDARLDYV QHLLSPDQVQ ANGLFKPTAV AHLKEKAQSG VRLSETEDMA LVGILSTQLL VERFIHEFRL PPPISEADSV RVCIRNGITV GGTYGI
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