| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0486 |
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| Symbol | |
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| ID | 5537949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 626924 |
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| End bp | 628135 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892648 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_001430634 |
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| Protein GI | 156740505 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACAG TGCCAATGTC ATCACCCGAC CTGACCGACG CAGAACGTGA TGCCATTCTG
AACGTTCTGC ATACGCCGGT CTTGAGCATC GGACCGTATG TGCAGCAGTT CGAGCAGCGC
CTGGCGGCGT TCGTCGGCGC ACGCTATGGC ATCGCGGTCA ATTCCGGCAC CAGCGGTTTG
CATTTGAGCA TCATTGCCGC CGGCGTGACC GAGTATGATC TGGTGGTCAC CACGCCATTC
TCATTCATTG CCTCAGCCAA CTGCATTCTG TATGAACGTG GCATCCCGAT CTTCGTCGAT
GTCGATCCGC TCACCGGCAA CATTGACCCA GAGCAGGTGC GTGCCGCCAT TGGCGACCTG
GCGCGCGGCG GTATGACGGC GCGCCGCTGG CTGCCCCCGG CGTTGCGCAA CAGTCGCTAC
GGGAGGTTAA AGGCGATACT GCCGGTGCAT GCCTTTGGTC AACCGGCGGA TATGGCGCCA
ATCGTCGCAA TTGCGCGCCA GCGCAATCTT GTGGTCATCG AAGATGCATG CGAAGCCCTG
GGTTCGGAAT ATCGCAACCG TCCAGCAGGA ACGCTGGGTG ACATCGCCGT TTTTGCCTTC
TACCCCAACA AACAGATCAC CACGGGCGAA GGCGGCATGA TCGTGACGAA CAACGAGGTG
TGGACGGCGC TGCTACGCAG CCTGCGCAAC CAGGGGCGCG ACGTCTTCGA CGCATGGCTG
AACCATACTC GTCTCGGCTT CAACTATCGC CTCGATGAAC TGAGTGCGGC GCTGGGATGT
GCGCAGATGC AGCGCATTCA CGAATTACTG GCGAAGCGCG CGCAGGTCGC CGCCTGGTAC
AATGAGCGAC TGGCGGACGT GGAACTGATC GAGCGTCCGA TCATTAGCGC AACGACCGCC
CGGATGAGTT GGTTCGTCTA TGTGGTGCGG ATCAAACCAC CCGCCAACCG TGATGCAGTG
ATGCGCCAGT TGGCAGCGAC AGGCATCCCC AGTCGTCCCT ACTTCACGCC AATCCACCTG
CAACCGTTCT ATCGCAAACG GTTCGGTTTC AGGCGAGGCG ATTTTCCGGT CACCGAGCGC
CTGGGAGATA CATCGCTGGC GCTGCCCTTC TCCGGCGTCG TGACCGAAGC GCAGGTGGAT
ATGGTCTGCG AACGGCTGCG CCAGAGCCTG GAGTGCGCGA TCACCCGCGA GGAAATGGCG
GACACGCTAT GA
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| Protein sequence | MDTVPMSSPD LTDAERDAIL NVLHTPVLSI GPYVQQFEQR LAAFVGARYG IAVNSGTSGL
HLSIIAAGVT EYDLVVTTPF SFIASANCIL YERGIPIFVD VDPLTGNIDP EQVRAAIGDL
ARGGMTARRW LPPALRNSRY GRLKAILPVH AFGQPADMAP IVAIARQRNL VVIEDACEAL
GSEYRNRPAG TLGDIAVFAF YPNKQITTGE GGMIVTNNEV WTALLRSLRN QGRDVFDAWL
NHTRLGFNYR LDELSAALGC AQMQRIHELL AKRAQVAAWY NERLADVELI ERPIISATTA
RMSWFVYVVR IKPPANRDAV MRQLAATGIP SRPYFTPIHL QPFYRKRFGF RRGDFPVTER
LGDTSLALPF SGVVTEAQVD MVCERLRQSL ECAITREEMA DTL
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