| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0451 |
|---|
| Symbol | |
|---|
| ID | 5537914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 569442 |
|---|
| End bp | 570686 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640892614 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001430600 |
|---|
| Protein GI | 156740471 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.252184 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACGT TATCGGTAGT GATCCCGGCG TATAACGAAG AAGATGGAAT TGCAGCCATT
GTTGAGCGGG TGCTGGCAAT CGAGCCTGAA TTGCCGAAAT ATGGCGTTGA TGCGCTGGAG
TGCATCGTAG TCGATGACGG TTCGCGCGAC CGAACGGCGG AAATCGTGCG GCGCTACGTA
CCGCGGGTGC GCCTGATTCA ACAGCCGAAC AAAGGGTATG GCGGGGCGTT GAAGACCGGC
TTTCAGGCGG CAAGCGGCGA GTTGCTCGGC TTTCTCGACG CCGATAGCAC CTATCCGCCC
GAATATTTTC CGCAGATGTG CCGGGTCGCG CTCGATGGCG CCGACCTGGT GATCGGCAGC
CGAATGGCAG GCGCAACGAG CGAGATGCCG CTGGTGCGAC GTATCGGAAA TTTCATTTTT
GCCAACCTGC TCTCCCTGGT TGCGGGTGTG CGCATCAGCG ATAGCGCGAG TGGTCAGCGG
GTCATCCGAC GCGAGGTATT GCCAATTCTC TATCCGCTTC CCGATACACT CGACTTCACG
CCGGCAATGA GCACGCGAGC GCTGCACGAA AACCTGCGCA TGGTCGAAGT GCCCATTCCG
TACAAGGAAC GCTCCGGGCG CAGCAAACTG AGTGTGGTGC GCGATGGGTT GCGTTTCTTC
AAGAGTATTG TATGGACGGC GTTGACCTAT AATCCGGTGC GGATCTTCGG CGGCATCGGC
GCATTGCTGC TCCTGCTGAG CATGCTGGTG ATGGTGCTGG CGTTCGGCTT GCAGGCGTTC
GGCATCGACT CGGTCGTCTC CTTCCCGCGT CTGTTCGGCG CGCTGGTGCT GGCGGTCGCC
GGGGTGACGC TGTACACGAC CGGGACATCG TTCAGTTATA TCGTTGCGCT ATTTCACAAG
CGCCCGATCC GGCAGGGCAT GTTCGGTCCG CGCGGCAACG GACGCAAGAT CGAGAAGCAC
TACTGGTGGC TGGGAATTCT GGCGGTTCTG CTGGGTGTTG CGCTCTATGT CGCCGCCGTC
GCTTTCGATC TGACCAATCC GGCGTTGCAG GTCTCGTGGT TTGCGCCGGT GGTCAGCGCG
CTCATGGTGC TGACCGGCGT GCAACTGGTG AGCGCCTGGA GCCTGGCGCG CGTGCTGGCG
GAACTGAGCG CGCGCGAGGG TCTGGCGGCG CGTGATCTTA CCGGCAATAG CGTGTCGGAT
GTCGCCGCGA ATGCCGAGAG CGTGCGGACT GCGGCGGTCT CGTGA
|
|---|
| Protein sequence | MTTLSVVIPA YNEEDGIAAI VERVLAIEPE LPKYGVDALE CIVVDDGSRD RTAEIVRRYV
PRVRLIQQPN KGYGGALKTG FQAASGELLG FLDADSTYPP EYFPQMCRVA LDGADLVIGS
RMAGATSEMP LVRRIGNFIF ANLLSLVAGV RISDSASGQR VIRREVLPIL YPLPDTLDFT
PAMSTRALHE NLRMVEVPIP YKERSGRSKL SVVRDGLRFF KSIVWTALTY NPVRIFGGIG
ALLLLLSMLV MVLAFGLQAF GIDSVVSFPR LFGALVLAVA GVTLYTTGTS FSYIVALFHK
RPIRQGMFGP RGNGRKIEKH YWWLGILAVL LGVALYVAAV AFDLTNPALQ VSWFAPVVSA
LMVLTGVQLV SAWSLARVLA ELSAREGLAA RDLTGNSVSD VAANAESVRT AAVS
|
|---|
| |