| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0443 |
|---|
| Symbol | |
|---|
| ID | 5537906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 559625 |
|---|
| End bp | 560470 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640892606 |
|---|
| Product | tellurium resistance protein TerC |
|---|
| Protein accession | YP_001430592 |
|---|
| Protein GI | 156740463 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.850021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCG CAGCCGTTAC GATTATTATC CAATTGATCT TTCTTGAAGG CATTCTGTCA
ATCGACAACG CTGCCGTCCT GGGGGCAATG GTCGCACACC TGCCGAATGA TCGCCCTATT
ACCTGGACCC CTGTGCTGCG CTTTCTGACG GCATGGTCGC AACGGGTTCT GGGGTATCAA
CGCGAAGCGG CGCTCAAAGT TGGCTTGCTC GGCGCGTATG TCGGGCGCGG GTTGATGCTG
GCGTTAGCAA GTGTCATTAT CCACGTGCCC TGGCTGCGCG CGATTGGCGC GGCGTATCTG
GTGTACCTGG CATTCCATCA TTTCGCCGAA CTGTACCACG CTCATCGCGC CGAAGCCGGG
CACGACCCAA TCCCACGCGC ACGCGGCGGG TTCTGGTCCA CCGTGCTGGC AATTGAACTT
GCCGACCTGG CGTTCAGTAT CGACAACGTG ATTGCAGCCG TGGCGCTGTC GGATGCATTC
TGGGTTGTGA TGACCGGCGT GGCGATAGGT ATTCTCGTGA TGCGCTTCGC CGCTACCATT
TTCACCCGCA TGATCGCCTG GGAACCGGCG TTGCAGACCG GCGCGTTTCT GCTCCTGCTG
GCGATTGGCG CCGAACTGCT GGCGGAGGAG ATGTGGCATG TGCATATCGA AGAAATGACC
CAATTTGTCA TCTCTGCCAG CATTCTGATC CTGACGGTGG TTGTGGCGCG CACGCCGTTG
CGGGTTCCTG TCGCGCTGGC GGCGCGTCCG CTGATCTGGC TCTCCGCGAT GATCCAGTTG
CGTATCGAGG CGACGACGGC GGCGATGACA GGTTCGTTCC GCCGCAAGGA GCAGCCGACG
GAATAG
|
|---|
| Protein sequence | MDIAAVTIII QLIFLEGILS IDNAAVLGAM VAHLPNDRPI TWTPVLRFLT AWSQRVLGYQ
REAALKVGLL GAYVGRGLML ALASVIIHVP WLRAIGAAYL VYLAFHHFAE LYHAHRAEAG
HDPIPRARGG FWSTVLAIEL ADLAFSIDNV IAAVALSDAF WVVMTGVAIG ILVMRFAATI
FTRMIAWEPA LQTGAFLLLL AIGAELLAEE MWHVHIEEMT QFVISASILI LTVVVARTPL
RVPVALAARP LIWLSAMIQL RIEATTAAMT GSFRRKEQPT E
|
|---|
| |