Gene Rcas_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0435 
Symbol 
ID5537898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp548348 
End bp549391 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content60% 
IMG OID640892598 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001430584 
Protein GI156740455 
COG category[R] General function prediction only 
COG ID[COG3380] Predicted NAD/FAD-dependent oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.164811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATCTGG CAATCATTGG TGCGGGAATG GCCGGTCTCA GCGCGGCGCG CGAACTTCGT 
CAGCGACATC CTGATCTCTC CATCACAATA TACGAGAAGA GTCGCGGCGT TGGCGGGCGT
GTGGCGACGC GCCGACGCAA CGGGTTCGTG TTCGACCATG GCGCACAGGT CATCAAAGCG
CAGGACGAAG ACATGGATCG CCTGTTGCAC ACCGGGCTTC CAACTGAAGG ATTGCGCCAT
ATCACACAAC CGGTGTATGT CTTCCATGCC GATGGCACGA TCGTCGAAGG CGATCCAACG
CTCAATGCCG AACCCTCCCG GTTCTATGCC GCCGGTCTCA ATCAGTTGGG AAAACTGCTT
GCCGCCGGAC TCGATGTGCG GCGGGAAATA CGGATTGCTG CGCTGCGCCA CGAAACGGGG
ACAGAGCGCT GGATGCTGTT TGATGCCAAC GGCGCGCATG CCGGAACCGC CGACGCGGTG
CTGCTGACGC CGCCGGCGCC GCAGACGGCG GAAATCCTGG CAATGAGCGA GTTCGATCCG
ACATTGCGCG ACGCGCTGGT GCGAGAACTG ATCCGCGTGC CGTATCGACG CTGCCTGACG
CTGACTCTGG CGTATGACCG ACCGATTGAG CGACCGTTCT ATGCGCTGGT TAATGTTGAT
CGGCAACATC CGGTGGCGTG GCTGGCGCTC GAACACACGA AGGGCACGGA ACGCTGCCCG
CCTGGACACA GCCTGTTGAT CGTTCAAATG TCCGGTCATT TTAGTTTGCA ACAGTGGGAT
GCACCGGCCG AAGAACTGGC ATCCGCCGTG ATAGAGATGG TCAGCATGGT GCTTGAGGAG
GATCTCCGCC GTCCAATGTG GTATGATCGT CAGGGATGGC GCTATGCTTT GCCGGATGGA
GTCGCAAAGG CGGACATGCT CAATAGCACG CAGACCGGAT TGTTCTTTGC GGGCGACTAC
GCTGTCGGGC TAGGGCGCAT CCACCTGGCG ATCAAGAACG GTCAGGAAGT CGCTCGCGCA
ATTGACGCCT GGCTCAATCG ATAA
 
Protein sequence
MHLAIIGAGM AGLSAARELR QRHPDLSITI YEKSRGVGGR VATRRRNGFV FDHGAQVIKA 
QDEDMDRLLH TGLPTEGLRH ITQPVYVFHA DGTIVEGDPT LNAEPSRFYA AGLNQLGKLL
AAGLDVRREI RIAALRHETG TERWMLFDAN GAHAGTADAV LLTPPAPQTA EILAMSEFDP
TLRDALVREL IRVPYRRCLT LTLAYDRPIE RPFYALVNVD RQHPVAWLAL EHTKGTERCP
PGHSLLIVQM SGHFSLQQWD APAEELASAV IEMVSMVLEE DLRRPMWYDR QGWRYALPDG
VAKADMLNST QTGLFFAGDY AVGLGRIHLA IKNGQEVARA IDAWLNR