Gene Rcas_0432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0432 
Symboldcd 
ID5537895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp546294 
End bp546848 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content56% 
IMG OID640892595 
Productdeoxycytidine triphosphate deaminase 
Protein accessionYP_001430581 
Protein GI156740452 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0717] Deoxycytidine deaminase 
TIGRFAM ID[TIGR02274] deoxycytidine triphosphate deaminase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGATCA AGTCCGACCG CTGGATACAG GTAATGGCGC GCGAATATGG TATGATCGAG 
CCGTTTGTTG CCGAACAGGT GCGCGGTGGT ATCATTTCAT ATGGGTTATC GTCCTACGGC
TACGACATGC GCGTCGCCGA TGAGTTCAAG GTGTTCACGA ATGTGTTCAA CACCCTGGTG
GACCCCAAGC ACTTCGATCC ACGCTCCTTC GTTGATATTC GCGGCGACTA CTGCGACATT
CCGCCGAACT CATTCGCGTT GGCGCGCTCG GTCGAATACT TCCGCATTCC GCGCAATGTG
CTCTGCATCG TGTTGGGGAA AAGCACCATC GCTCGCTGCG GCATCATTGT GAATGTGACG
CCGCTTGAGC CAGAGTGGTG CGGGTACGTG ACCATCGAAA TCTCGAATAC GACGCCATTG
CCTGCGCGCA TCTATGCCAA CGAAGGGATT GCGCAGGTGC TATTCCTGGA AAGCGACGAA
CCGCCGCTTG TGTCGTATGC CGATAAAGCG GGCAAATATC AGAATCAGAC GGGGGTTGTG
CCGCCGCGAT TGTAG
 
Protein sequence
MTIKSDRWIQ VMAREYGMIE PFVAEQVRGG IISYGLSSYG YDMRVADEFK VFTNVFNTLV 
DPKHFDPRSF VDIRGDYCDI PPNSFALARS VEYFRIPRNV LCIVLGKSTI ARCGIIVNVT
PLEPEWCGYV TIEISNTTPL PARIYANEGI AQVLFLESDE PPLVSYADKA GKYQNQTGVV
PPRL