| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0417 |
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| Symbol | |
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| ID | 5537879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 529647 |
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| End bp | 530300 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892579 |
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| Product | putative transaldolase |
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| Protein accession | YP_001430566 |
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| Protein GI | 156740437 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0176] Transaldolase |
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| TIGRFAM ID | [TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.67449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCT ATCTCGATAC CGCCAATCTG GACGAAATTC GCACCGCTGC CAGTTGGGGC
GTGCTCAGCG GCGTTACGAC AAACCCATCG CTTATGGCAA AGGAAAAGGG CGCCGATTTC
AAGGCGACCA TTCAGGAGAT TGCAAGTCTC GTTGATGGTC CCATCAGCGC CGAGGCGACC
TCGCTCGACG CGGACGGCAT GGTGCGCGAG GGGCGCGAGT TCGCAACCTG GCATCCGAAT
GTCGTGGTCA AGGTGCCAAG CACGACCGAA GGGTTGAAAG CGGTCTCACG CCTGGCGCGT
GATGGCATCC GCTGCAACGT GACACTCTGC TTCAACGCGG TGCAGGCGCT CATGGCGGCG
CGCGCCGGCG CCTTCATCAT CAGCCCGTTC GTCGGGCGTG TCGACGATGT AGGGGTCGAT
GGCATGAGTC TGATCCGCGA GATTGTGCAA ATCTACCGAG CGCACAACAT TTCGACGCTG
GTGCTGGCGG CATCGATCCG TCACCCGCGC CATATCGTCG AGGCGGCGCT GGCAGGCGCG
GATATTGCCA CGTGCCCGTT CAAGGTGCTT GAGCAGAGTA TGCGCCATCC GCTGACCGAT
ATTGGGATCG AACGTTTCCT GGCGGATTGG AAAGCCTGGC AGCAGGGCAG GTGA
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| Protein sequence | MQIYLDTANL DEIRTAASWG VLSGVTTNPS LMAKEKGADF KATIQEIASL VDGPISAEAT
SLDADGMVRE GREFATWHPN VVVKVPSTTE GLKAVSRLAR DGIRCNVTLC FNAVQALMAA
RAGAFIISPF VGRVDDVGVD GMSLIREIVQ IYRAHNISTL VLAASIRHPR HIVEAALAGA
DIATCPFKVL EQSMRHPLTD IGIERFLADW KAWQQGR
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