Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0415 |
Symbol | |
ID | 5537877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 525416 |
End bp | 526963 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640892577 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001430564 |
Protein GI | 156740435 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.866195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACATCG GAGATTGGCT GGCGCGGCGA GCCGATCTAA CGCCGCACAG GATTGCACTC CTGGACGCCG CTGATAACCT TCGACCGATC ACGTTTCGCC TGTGGCATAC GAATGTCAGT CGCACTGCTC GATTCCTCGC TGGACGGTTT GGAGTACAGC CTGGCGACCG GGTGGCGGTG CTGGCGATGA ATTGCGTCGC CTATCTGGAT ATCTGGTTCG CCTGCGGTAA ACTCGGCGCC ATTCTCCAGA ACCTCAACTG GCGGCTCACA CCAACGGAAC TTGCCGGACT GATCGCCGAT GCCGAACCGG CGCTTCTGAT TTACGGACCG GATTTCGTCG AACAGGTGCG CGCGCTGCGC AGTGCCGGGA TCGTGACTCC AGGCATTGCA CTCGATGCCG ACTGCCGCGC CGATCCTGGC GACCCCGTTT TTGCCGAACG CGACGCATAC CCCGATACGC CGCTTCAGGC GGTCGATCTC ACGGCGGATA CTCCCTGGAT CATCTGCTAC ACCGGCGGCA CAACGGGATT GCCAAAGGGC GCGATCCTGA CGCACGGCAA TGTCTTCTTC AATGTGGTCA ACACCGTCGC CGGATGGGGG TTGCGCCCCG ATGATGTGAC CATCCTCAAC GCGCCGTTAT TTCACACCGG CGGGCTGAAT GTGTTCACAG CGCCACTGGC GCATATCGGC GGTATGTCGA TTGTATGCCG CCAATTCGAT CCAGATCAGG TGTTCGATCT GATTGAACAG CAGGGCGTTA CCATCTATTT CGGCGTGCCG ACGATGTTCC TGGCGCTCCA GCGCCATCCG CGCTGGGAGA CGGCAGATTT CTCACGAGTG CGCTGGATGA TCAGCGGCGG CGCGCCATGC CCGCCGCCGG TCTTCGAGAC CTTCCGCCGC CGGGGGGTGC CCTTCCGCAC CGGGTATGGG TTGACCGAAG CCGGACCGAA TACGTTCTGG CTACCTGATG ATGACATCGA ACACAAGGCG GGGTCAGTCG GCTATCCGTT ACCGCATATC GACCTGCGAT TGGTGAATGA GCGCGGCGAG CCGTGCGCAC CCGGAGAAGT CGGCGAGTTG CAGATTCGTG GGGCGCACGT TTGCGCAGGT TACTGGCGGC GACCGGCGGA AACTGCGGCA ACAATCGTCG ATGGCTGGTT GCGCACCGGC GACCTGGCGC GGCGTGACGA AGAGGGATGC TACACCATCG TCGGACGCCT GAAGGATGTT ATCATTTCGG GTGGCGAAAA CATCTACCCG GCTGAGGTGG AAGCAGTGAT TGCCGGGCAT CCGGCAGTGC TGGAAGTTGC GCTGATCGGC GCACCGGATG CAACATGGGG CGAGGTAGGG TGGGCGGTCG TCGTACTGCA CGAGGCGTCT CGACAGCAGA TAACCGACAT TGAGCGGCAG ATTCTCGACT ACTGCCGCGA CCGGTTGGCG CGGTACAAAA TCCCGAAACG TGTCATCGTC GTGGATGCCC TGCCGCGCAC CGGTGCGGGC AAAATCGATA AACGCGCATT GCGACGGGAG TTTGTCGTTG AAGGTTGA
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Protein sequence | MYIGDWLARR ADLTPHRIAL LDAADNLRPI TFRLWHTNVS RTARFLAGRF GVQPGDRVAV LAMNCVAYLD IWFACGKLGA ILQNLNWRLT PTELAGLIAD AEPALLIYGP DFVEQVRALR SAGIVTPGIA LDADCRADPG DPVFAERDAY PDTPLQAVDL TADTPWIICY TGGTTGLPKG AILTHGNVFF NVVNTVAGWG LRPDDVTILN APLFHTGGLN VFTAPLAHIG GMSIVCRQFD PDQVFDLIEQ QGVTIYFGVP TMFLALQRHP RWETADFSRV RWMISGGAPC PPPVFETFRR RGVPFRTGYG LTEAGPNTFW LPDDDIEHKA GSVGYPLPHI DLRLVNERGE PCAPGEVGEL QIRGAHVCAG YWRRPAETAA TIVDGWLRTG DLARRDEEGC YTIVGRLKDV IISGGENIYP AEVEAVIAGH PAVLEVALIG APDATWGEVG WAVVVLHEAS RQQITDIERQ ILDYCRDRLA RYKIPKRVIV VDALPRTGAG KIDKRALRRE FVVEG
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