Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0398 |
Symbol | |
ID | 5537860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 504663 |
End bp | 505061 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640892561 |
Product | hypothetical protein |
Protein accession | YP_001430548 |
Protein GI | 156740419 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02436] conserved hypothetical protein TIGR02436 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00259667 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCAGAATG ATGAATGCGG AATGCAGAGA GGAAGCATGG AGCAGAAACG GGATATTCTG GAGAGAACGA AGGCGTTTGC CTTGCGCATT ATCCGCTTAT ATAGCGCCTT ACCTCAGAAG ACAGAGGCGC AGGTCCTGGG GAAGCAAGTG TTGCGCTCCG GCACGTCGGT GGGCGCGCAA TTGCGCGAGG GCAAGCGCAG CCGCTCGGAT GTAGAGATGA TCAGCAAGAC CGAAAGCGCG CTCCAGGAAC TCGAAGAAAC GGCCTATTGG CTGGAATTGC TCGCCGAATC CGGCATTGTG AAAGCCGAAT TGCTCGCCGA TCTGCAACGC GAAACAGACG AACTCACAGC TATCCTTGTT ACCAGCGTCA AAACCCTGAA ATCGCGGAAA GCCAAATGA
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Protein sequence | MQNDECGMQR GSMEQKRDIL ERTKAFALRI IRLYSALPQK TEAQVLGKQV LRSGTSVGAQ LREGKRSRSD VEMISKTESA LQELEETAYW LELLAESGIV KAELLADLQR ETDELTAILV TSVKTLKSRK AK
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