Gene Rcas_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0398 
Symbol 
ID5537860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp504663 
End bp505061 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content55% 
IMG OID640892561 
Producthypothetical protein 
Protein accessionYP_001430548 
Protein GI156740419 
COG category 
COG ID 
TIGRFAM ID[TIGR02436] conserved hypothetical protein TIGR02436 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00259667 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAGAATG ATGAATGCGG AATGCAGAGA GGAAGCATGG AGCAGAAACG GGATATTCTG 
GAGAGAACGA AGGCGTTTGC CTTGCGCATT ATCCGCTTAT ATAGCGCCTT ACCTCAGAAG
ACAGAGGCGC AGGTCCTGGG GAAGCAAGTG TTGCGCTCCG GCACGTCGGT GGGCGCGCAA
TTGCGCGAGG GCAAGCGCAG CCGCTCGGAT GTAGAGATGA TCAGCAAGAC CGAAAGCGCG
CTCCAGGAAC TCGAAGAAAC GGCCTATTGG CTGGAATTGC TCGCCGAATC CGGCATTGTG
AAAGCCGAAT TGCTCGCCGA TCTGCAACGC GAAACAGACG AACTCACAGC TATCCTTGTT
ACCAGCGTCA AAACCCTGAA ATCGCGGAAA GCCAAATGA
 
Protein sequence
MQNDECGMQR GSMEQKRDIL ERTKAFALRI IRLYSALPQK TEAQVLGKQV LRSGTSVGAQ 
LREGKRSRSD VEMISKTESA LQELEETAYW LELLAESGIV KAELLADLQR ETDELTAILV
TSVKTLKSRK AK