Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0369 |
Symbol | |
ID | 5537831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 459943 |
End bp | 461013 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640892532 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_001430519 |
Protein GI | 156740390 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.117824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.3088 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATACGTC ACCACGGTGT GCGTCGTCGT TTTGTTCTCA CGCTATTGGG CATGATGGCG CTGACCGGAA TTATCGCCAT CGCCCGCCTC GGCTTCGAAT GGAAACAGGC GCTCGACGAT GTGGACGCAA TGATCGTGAC GCCCGTCGTC CTTGCGCCGA CCCCTGAACC GATGCTCAGC ACGTCGGTTC CTGCCGATGC GCCGGTGAAT CCTCTACCGC TATTGCCAAC CGTCGCTCCA ACAATGGCGC CTGAGAATGA TGATCCGGTC AATATTCTGC TCCTCGGCGC CGATGCGCGC GTTGGCGAAG AGATCAGCCG TACCGATGCC ATCATTCTGC TCCATATCAA TCCGCGCACC GGTCGCGTCA GTATGCTGTC GTTCCCGCGC GATCTGATGG TCGATACGCC GGGATTTGGG CGACGGAAAA TTAATTCGGT CTATCTGCTT GGCGAGACCC GTCTTGGCAA AGGGTATGGC GCTGCTTTGT TAAAGCAAAC CGTCTCTGAT CTGGTCGGCG TTCCGGTCCA TCACTTTGCG CTGATCAACT TCGAGGGGTT TCGCCGTGTT ATCGACTTGG TCGGCGGTAT TTCCATCGAT GTGCCCAAAG TGATCGATGA TCCGCGCTAT CCGGTGGATG CGTTCCCCGG CGATGTGCGC ACGATGCAGG TGCGCTTCGA ACCGGGGACA CAGTGGATGG ATGGTGAACG CGCCCTGATC TATGCGCGCA CACGCCATGC CGATAGCGAC TTCGGGCGGA ATCAACGTCA GCAACAGGTG CTGCTGGCGC TGGTCGAACG TGTGCGTGAA CGTGGGCTGA TTTCGCAGAT CAACAAGATC GACGACTATA CCAGCGCCCT GCGCGACTAT GTGCGCACCG ACGTGCCACG CAGCGAGATG ATCCGCCTGG CGCGCGCTGC AAGCCGCATG GACCTCGATA ATATTCAGCG GTATGCGATC GACTCGAAGA TGATTATCAC GCTGGGCAGC CCCGATACGT TTGCGGCTGA TCCTAAAGCC TTGCGCGAAG TCGTTGACCG CATGATCGCC GGAGGCGCCC CCACGCCATA G
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Protein sequence | MIRHHGVRRR FVLTLLGMMA LTGIIAIARL GFEWKQALDD VDAMIVTPVV LAPTPEPMLS TSVPADAPVN PLPLLPTVAP TMAPENDDPV NILLLGADAR VGEEISRTDA IILLHINPRT GRVSMLSFPR DLMVDTPGFG RRKINSVYLL GETRLGKGYG AALLKQTVSD LVGVPVHHFA LINFEGFRRV IDLVGGISID VPKVIDDPRY PVDAFPGDVR TMQVRFEPGT QWMDGERALI YARTRHADSD FGRNQRQQQV LLALVERVRE RGLISQINKI DDYTSALRDY VRTDVPRSEM IRLARAASRM DLDNIQRYAI DSKMIITLGS PDTFAADPKA LREVVDRMIA GGAPTP
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