| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0305 |
|---|
| Symbol | |
|---|
| ID | 5537767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 380534 |
|---|
| End bp | 381751 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640892469 |
|---|
| Product | FeS assembly protein SufD |
|---|
| Protein accession | YP_001430456 |
|---|
| Protein GI | 156740327 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
|---|
| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0845651 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTATGA AGACGTTTCC TCCGCTTGGC GAAATCAGCG ACGCCCTGGT GATCGAGACA
TCGCGGGCTG CGGATGAGCC GGCATGGCTG ACGGAGCAGC GCGCAGAAGC GTGGCGCTTC
TTCGCCTCGG TTGAACCACC CTACTGGCGT CGCACCGATC TGTCGAAGTT CAAGCCGGAT
CAGGTGATCG CGGCTGCCGA TACGGCCGCA ACCAGTCTCT ATCAGGAAGA AGACCTGACG
GAGCAGGGAG TGGTGTTGAC CACACTGGCG CAGGCGCTTC ATTCCCACGA GACGCTCATC
CGGCGGCATC TCGGCGCTGC TATCGAGCCG ACGCGCCATA AGTTCCTGGC GCTCAACGCG
GCGCTCTGGA AGGACGGCGT CTTTCTGTAT GTGCCGAAGA ATGTCAGCGT CGAATTGCCG
CTGACGGCAG TCTTCTCGAT GCCGATCCCC GGCGGGGCGA TTGTTCCGCG CAACCTGATC
ATCCTCGATG ATGGCGCTAG TGTAACGTTT GTTGAGGAGT ATCACTCGAT TGCGGCGTCC
GATCAGGCAT TTGCCGCGCC GGTCACCGAG ATGTTCCTTG GCAATGACTC GACCCTGCGT
TTTATTGCGG TGCAAACGTG GGGTGAGGAT GTGTACCACA TCGGCGCGCA GAAAGCGCGC
GTCGGGCGTG GGGCGGCCAT CGAGTGGGCA GCCGTCAATC TTGGCGCGCG CGTCCAGCAT
ATCGAGGCGG AAACCGCGCT CGAAGGGGAT GGGTCGCGCG TCGAGTGGGT GGCGGCGACG
TTCGCCGGTG ATCATCAGAA TCTGCTGACG GCGCCATGGC TCCGCCATAT CGGCGCGAAA
ACTGAAGCGC ATATGGACTT TAAGACCGTC GTCAAGGATC AGAGTTACAC AACCTTCGAC
GGGATGATCA AGATCGAACA TCAGAGCCGC GCAACGGTCT CGCGTCTCGA GGAGCATGCA
CTGCACCTCT CGCCAAAGGC GCGCAGCGAC TCGATCCCTG GGCTGATGAT CGATACGAAC
GACGTCGCCA GGGCGGGGCA CGCCTCGACC AGCGGCGAGG TGGATGAGGA GCAGTTGTTC
TATATGCGCT CGCGCGGCAT TCCGCGTGAT GAAGCCATCC ATCTGATTGT GATGGGGTTC
TTCGAGCCGG TGCTCGACCG CATTCCCAAC GATGCGCTGC GCCAGCGCAT TGCAGAGATG
ATCGAGGCAA AGATTTGA
|
|---|
| Protein sequence | MTMKTFPPLG EISDALVIET SRAADEPAWL TEQRAEAWRF FASVEPPYWR RTDLSKFKPD
QVIAAADTAA TSLYQEEDLT EQGVVLTTLA QALHSHETLI RRHLGAAIEP TRHKFLALNA
ALWKDGVFLY VPKNVSVELP LTAVFSMPIP GGAIVPRNLI ILDDGASVTF VEEYHSIAAS
DQAFAAPVTE MFLGNDSTLR FIAVQTWGED VYHIGAQKAR VGRGAAIEWA AVNLGARVQH
IEAETALEGD GSRVEWVAAT FAGDHQNLLT APWLRHIGAK TEAHMDFKTV VKDQSYTTFD
GMIKIEHQSR ATVSRLEEHA LHLSPKARSD SIPGLMIDTN DVARAGHAST SGEVDEEQLF
YMRSRGIPRD EAIHLIVMGF FEPVLDRIPN DALRQRIAEM IEAKI
|
|---|
| |