Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0303 |
Symbol | |
ID | 5537765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 379069 |
End bp | 379698 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640892467 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_001430454 |
Protein GI | 156740325 |
COG category | [K] Transcription |
COG ID | [COG2345] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.320797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.117195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTGG CGCAGTATAC CGAAGACACG CCGGCAGGGA AGATTCTGAC CTACCTGCGA CGTCATGGCG AAGCGACGAT CAAAGACCTG GAAGAGTTGT TGGGTATCAG CACGACGGCG GTGCGCGAGC ATCTGGCGCA TCTGGAAGCG AAAGGTCTGC TGACGACGCG GCAGGCGCGT GGCGGTCCCG GTCGTCCAAG ACTGGTGTAC TCGCTCACAC CCCGCGCCGA AGACCTGTTT CCGAAGGAGT ACGATACACT GGTCACATTG CTGCTGCGCG AGATTGCGAG CCGCGAGGGG AAAGAGCGAC TTGACGCGCT GCTCGAGGCG GTCGGGAAAC GCCTGGCGGA AGAGTACCGT GGGCAGGTGG TCGGCGATGA TGTGGAAGAA CGCCTGGCAC ATCTGCGTGT CACGCTCGAA GCGCGCGGCA TTCCGGTGGA AGTGACGCCG GACGGCGCAT TGCAGGTGTT CGCCTGCCCG TACCACGACG TGGCGCAAGA GCATGCCGGC GTGTGCATCA TGGAGCGTCG TATGCTCGAG CAGGTGCTCG GCGAGCGGGT GGAGATTGAG GGCACCATTC GCGAAGGGCG TCGCAATTGT CATTTCCAGA TTACGCGGTC TTCGGAGTAG
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Protein sequence | MTLAQYTEDT PAGKILTYLR RHGEATIKDL EELLGISTTA VREHLAHLEA KGLLTTRQAR GGPGRPRLVY SLTPRAEDLF PKEYDTLVTL LLREIASREG KERLDALLEA VGKRLAEEYR GQVVGDDVEE RLAHLRVTLE ARGIPVEVTP DGALQVFACP YHDVAQEHAG VCIMERRMLE QVLGERVEIE GTIREGRRNC HFQITRSSE
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