Gene Rcas_0285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0285 
Symbol 
ID5537747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp352753 
End bp353661 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content63% 
IMG OID640892449 
Productdimethyladenosine transferase 
Protein accessionYP_001430436 
Protein GI156740307 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID[TIGR00755] dimethyladenosine transferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCTG CGAATCCTTA CCTCTCCCTC GCGCGCGTCC GCGCTGCGCT CCACGCTCTG 
GACCTGCGCC CTTCCCGCAG TATGGGGCAA AACTTCCTGA TCGACGGCGC TGCACTGGCG
AAGATTGTCA ACGCTGCCCA ATTGACCTCT GATGATACAG TCATCGAAGT TGGTCCCGGT
TTGGGTGTGC TGACGTGGGA ATTGATGCAC CGCACCCGCG CAGTCATCGC CGTCGAACTC
GACCATCGCC TGGCGGATCG GTTGCGCGCC GAGTTTCGCG CGTTCTCCAA TCTGGCGATC
ATCCAGGGCG ATGTGTTGCG CCTACCACCA GAGGCGATCC TCGCAGAACA CGACCCCGAC
GCATCCTCCG GCGCCCGACC GTACAAGGTC GTCGCCAATC TTCCCTATGC CATCACATCA
GCAGCGCTGC GCCACTTCCT CAGCAACCCG CTCCGCCCGG CGCTGATGGT CGTGCTGGTG
CAACGCGAAG TCGCCGACCG CATCTGCGCG CGCCCCGGCA ATCTGAGTGT CCTGGCGCAT
GCTGTCCAGA TCTATGCCGA ACCCGAGATC ATCGCGCGCA TCCCGGCTTC CTGTTTCTTT
CCCACACCCG AAGTCGAGTC GACCGTTCTG CGGTTGCGGA TTCGCCCGCA ACCTGCCGTT
GTACCCGATC AACCGGAGGC GCTGCTGCGC CTGATCAAAG CCGGGTTCCT CCATCCGCGC
AAGCAGTTGG GAAACGCGCT ACCCGGCGGA ATGGCCGCCA TGGGGATGAA AACCGACAAA
CAGAAAATCC TGAACGCGCT CACCGCCGCC GGCATCAACG CCACCCGCCG CGCCGAAACC
GTGACCCTCG ATGAATGGGG CGCGGTGTAT CGGGCATTGA AGATGGACAG CGAGAAGGTG
AAAGGGTGA
 
Protein sequence
MTSANPYLSL ARVRAALHAL DLRPSRSMGQ NFLIDGAALA KIVNAAQLTS DDTVIEVGPG 
LGVLTWELMH RTRAVIAVEL DHRLADRLRA EFRAFSNLAI IQGDVLRLPP EAILAEHDPD
ASSGARPYKV VANLPYAITS AALRHFLSNP LRPALMVVLV QREVADRICA RPGNLSVLAH
AVQIYAEPEI IARIPASCFF PTPEVESTVL RLRIRPQPAV VPDQPEALLR LIKAGFLHPR
KQLGNALPGG MAAMGMKTDK QKILNALTAA GINATRRAET VTLDEWGAVY RALKMDSEKV
KG