Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0265 |
Symbol | |
ID | 5537727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 330058 |
End bp | 332067 |
Gene Length | 2010 bp |
Protein Length | 669 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640892429 |
Product | TAP domain-containing protein |
Protein accession | YP_001430416 |
Protein GI | 156740287 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0441544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0338675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCTGC GGTTTGCTCT CTTGATCATC GCGCTCTTCT TGAGCGCGTG TGCGGTTCCG TCGGCATCGA ATCCGACGCC AACCCTGGCG CCGGGCGCCG AAGCATTGCT CGGCGCGCCG ACGACAACGC CGGTTCCGGC GCCGACCGCG GCGCCGGGGT CTACGGTCGC GCCAACGGCG ACGGCGGTGC GGACGGTTGC ACGCTATGAA ACGGCAAATT GCGAATTTCC GCCGCCAGGC GGTGTCTCGG TCGAGTGCGG TTGGCTGACA GTCCCGGAGG ATCGCGCGAA ACCCGATAAT GGCAGAGAAG TGCGCCTCCA CGTCGCCATT TTTCGCAGCA CCCGCCCCGA CCCGCCCCCC GATCCCATCG TCTACCTCGA AGGGGGTCCT GGCGTCGATG CGCTGGAGCG CCTGCCATTA GTGTTCGATC TCTGGTTTCG ACCGTTCCTT GCCAATCGCG ACTTTATCCT GTACGACCCG CGCGGCGCCG GTTATTCGAC TCCGTCGCTG GCGTGCCCTG AGCTGACGAA ACTCAGTTTT GATATGCTGC CGATGGATGT TCGCGCTGCT GAAAGTTCGC GTCTCTGGGG CGAAGCGGCG CTCAAATGCC GCGAACGCCT GGTTGCGGAA GGCATTGATC TGGCGCAGTA CAATACGCTC ACCGGCGCCG CCGATCTGGA GGACCTGCGC CTGGCGCTCG GCTATGAACA GTGGAACCTG ATCGGCAGTT CGTATGGCAC GCGCCTGGCG CTCACCGCCA TGCGCGAGTA TCCGCAGGGC ATTCGGAGCG TGGTGCTCGA CTCGACGCGC CCGCCGCAGA TCAATGAGTC GCAGACGCCG GCCGATGCTG AGCGCGCCTT TCAGACGCTG TTTCGCGGTT GCGCCGCCGA CCCGGATTGC AATGCGGCGT ACCCCGACCT CGAGCGGGTG TTCTATGACC TGGTAGAGAA ACTCAATACG CAACCGGTGA CGTTGCCCGG TGTTGATCCG TTTACCGGAC GCACCTACGA GGTGTTGATC AACGGCGATA CACTGATCAG CACATTGTTC CAGGCGATGT ATTCGACGGA AATCATTCCG CTGCTGCCGC GCGCGATCTA TGGTGCGGCG CAGAAGAATG AGTTCAGTCT GTGGGTGCGT CTGATCATGA ACAATGTCTC GCAGAGCGAC TATTTCAGTT ATGGAGTGAT GTATTCCTCA CGCTGCTATG ATGAGATTCT CTTCGAGACG CGCGAGGCGA TGGCAAAGGC GGATGAACCC TTTCCGCATC AGCAGGACGT GTTCGATATG ACGGCGTTCT GGGACATCTG CAACGCCTGG GGTGTCGGTG TGGCGCCGCC AATCGAAAAT CAGCCGGTGC GCAGCGCTAT TCCTGCGCTT ATCCTCGCCG GAACCTACGA CCCGGCGACG CCGCCGGATG ATGGCAAAGA AGCAGTGGCG ACGCTGCGCA ACGGTTTCTT CTTCGAGTTC CCATCATCGG GTCACGGCGT TCTTCTCGAT GGCGGTTGCC CGTTAAGCAT GGCGCTGGCG TTTCTCGATA ATCCGCAGCG CCAACCGGAC GCGGCGTGTC TGGCGCAGCT CGGCGGACCG GCGTTCGATG TCGAAGGTGC GGCGGTGCGC ATGATCCCGT TCCGCGATAG CGATGCGGGT ATTGCCGGCG TCACGCCGCA GGGATGGACC AATTTCGGGC AGGGCGTGTA TGGCCGTCCG TCAGGTGATG TCGCCATCGT TCAGATGCGG ACGCCGCTTT CGGCGCTCGA AATGCTGGCG AGATTAGACC AGCAGTTCGA TCTGGATAGC AAGCCTGAAT CGGCGGGTGA GTACCGCAGC GAACGCTATG CCTGGCAACT CTACACCGCA ACGATCCGTG GACAACCGAC CGACATTGCG CTGACAGAGG ACGGCGGTCG TGCGTTGCTG GTGCTGATGA TCAGCGACCC GGGCAATCGC GATGAGATGT ATGAGCAGGT GTTTCTGCCG GTGCTCGATG CGCTGCGGGT GATTTCGTAG
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Protein sequence | MHLRFALLII ALFLSACAVP SASNPTPTLA PGAEALLGAP TTTPVPAPTA APGSTVAPTA TAVRTVARYE TANCEFPPPG GVSVECGWLT VPEDRAKPDN GREVRLHVAI FRSTRPDPPP DPIVYLEGGP GVDALERLPL VFDLWFRPFL ANRDFILYDP RGAGYSTPSL ACPELTKLSF DMLPMDVRAA ESSRLWGEAA LKCRERLVAE GIDLAQYNTL TGAADLEDLR LALGYEQWNL IGSSYGTRLA LTAMREYPQG IRSVVLDSTR PPQINESQTP ADAERAFQTL FRGCAADPDC NAAYPDLERV FYDLVEKLNT QPVTLPGVDP FTGRTYEVLI NGDTLISTLF QAMYSTEIIP LLPRAIYGAA QKNEFSLWVR LIMNNVSQSD YFSYGVMYSS RCYDEILFET REAMAKADEP FPHQQDVFDM TAFWDICNAW GVGVAPPIEN QPVRSAIPAL ILAGTYDPAT PPDDGKEAVA TLRNGFFFEF PSSGHGVLLD GGCPLSMALA FLDNPQRQPD AACLAQLGGP AFDVEGAAVR MIPFRDSDAG IAGVTPQGWT NFGQGVYGRP SGDVAIVQMR TPLSALEMLA RLDQQFDLDS KPESAGEYRS ERYAWQLYTA TIRGQPTDIA LTEDGGRALL VLMISDPGNR DEMYEQVFLP VLDALRVIS
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