| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0256 |
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| Symbol | |
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| ID | 5537718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 313588 |
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| End bp | 315546 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892420 |
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| Product | DNA primase |
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| Protein accession | YP_001430407 |
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| Protein GI | 156740278 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.230248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.131007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGGCG TTACCGATCA GATCAAAGAA AAGATCGATA TTGTCGATTT CATTTCCGCC
TATGTGCCAT TGCGAAAGAC GGGGCGCAGT TATGTCGGCT TCTGCCCGTT CCATCCCAAC
ACCCGCACAC CGGCGTTTCA CGTCTTTCCC GACACCCAAA GTTTTCACTG TTTCGGTTGC
AAAGCGTCGG GGACTATCTT CGACTTTCTC ATGCGGCGCG AGGGGATAGA GTTCCGCGAA
GCGCTCGAAC GCCTGGCACA GCGCGCTGGC GTGCAGTTGC ATCCGCGCAC CGAAGCCGAA
GAGCAACAGG ATCGGCTGCG CACCCGCCTG CTGGAAGTGA ATGCAGCCGC AGCCGCGTTC
TTTCGCCACA TGCTGGTGAA GTCGCAACGC GGCGAGGAGG CGCGCGCATA TGTCGCCAAA
CGGCGCATTG ACGACGCGAC CGGTGAAGCG TTCCTGATCG GCTACGCTCC CGACGACTGG
AGTTTGTTGC TCTCCTATCT GACCGAACGG CGCGGCTTTG CACCGGAAGA AATCGAAGCC
GCCGGTCTGG CGATCCATCA CGAAACCCGT GGGTATTACG ACCGGTTCCG CCATCGGCTC
ATGTTCCCGA TTCGCTCCGC GAGCGGCGAG ATTGTGGCGT TTGGCGGCAG GGCGTTGGGA
GATGTGCAAC CGAAGTATAT GAACTCGCCG CAAACACCGC TCTTCGACAA GGGCAAGGTC
TTGTACGGGC TTGACCTGGC GCGCGATGCA ATCCGCCAGA GCGACGCCGC GGTGATCGTG
GAGGGGTACG TCGATGTGAT TATTGCCCAT CAGTATGGGT TTCGCAATGT CGTTGCGCCG
CTCGGCACGG CGTTGACCGC CGATCACGTG GCGCTGGTGA AGAAACTCTC GCACCGGGTG
TATCTGGCGC TCGACGCCGA CACCGCCGGC GCGCGCGCGA CGCTCAAGGG GTTGCAGGCG
CTCCAGAGCC AACCGGAGGG TGAATTGACC GCGGTCATCT CGCCGCAGGG GGTGATCGCG
CTGCAACGCC GCCAGGATGT CGAGATCAGA ATCCTGGCGC TCCCCGAAGG CAAAGACCCC
GATGAGGTCA TTCAGGAAAA TCCGGAGCAG TGGCGCGCGG CGCTGGCAGC GGCGCGCCCG
GCAATGGATT TTTATATCGA GACGCTGACA TCCGACCTTG ATCTGTCGAG CGGGCGTGGG
AGAGCGGAGG CTGTCGAACG AATAGCGCCG CTCCTCACAC AGATCGCCAA TCCGGTTGAG
CAGGCGCACT ACATTCAGCA ACTGGCACGA CTGATCGATA TCGAGGAAGC GCATATCCTC
GCAGCGTTGA GCAATAAGGC GCGCCAGGAA GGGCAGCGCC GTCCGTCGGA TCAGGGACGC
GCGACAAAGG TTCTGGAACA GCAACCTGGC GACGCAAACC AGCAACCCGA TGAAACCCCG
CCGCCTCCAA CGCAAGAGGA GTATTTGTTG AGTTGGATTA TTCGCTACCC GACTGCGCGC
GCTGCCGTGG AGGAGAAACT TCATCGCGAT CTGGCGACGT ATCCGGCATT GCAATCGCTT
ATGAGCGGAA CCATCGACGA GTTGTTCACT TCTGATGAAT GCCGCGCACT GTGGCGCGCC
TGGATCGCCG CCCCCACCGG GAGCGACCCG CAGGCGTGGG CGACGACTCT GTATGCGCCG
CTCGACGCGG TGGCGCAGCG TGTGCTGGAG TTGCACGCAC CACAACCTCA GGCGTATCGG
ATTGTCAACG ATGCACTGGA ATGTGCTACA ATCCTTCAGC GCGATGCTGC AAAACGCTGG
CTCGTCCAGA TCGCGCGCAT GCAGACGGCA GCGACCGGTG AAGCAGAACA GGAAATCCTG
CTCGACCAAC TGGTGCAGGT CAAACAGTTT ATCAATATGT TGAGCATCCC ACGCCGGAGC
TCAGCATATG CCGACCTGCA TGTCCTGCAT ATGCCCTGA
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| Protein sequence | MPGVTDQIKE KIDIVDFISA YVPLRKTGRS YVGFCPFHPN TRTPAFHVFP DTQSFHCFGC
KASGTIFDFL MRREGIEFRE ALERLAQRAG VQLHPRTEAE EQQDRLRTRL LEVNAAAAAF
FRHMLVKSQR GEEARAYVAK RRIDDATGEA FLIGYAPDDW SLLLSYLTER RGFAPEEIEA
AGLAIHHETR GYYDRFRHRL MFPIRSASGE IVAFGGRALG DVQPKYMNSP QTPLFDKGKV
LYGLDLARDA IRQSDAAVIV EGYVDVIIAH QYGFRNVVAP LGTALTADHV ALVKKLSHRV
YLALDADTAG ARATLKGLQA LQSQPEGELT AVISPQGVIA LQRRQDVEIR ILALPEGKDP
DEVIQENPEQ WRAALAAARP AMDFYIETLT SDLDLSSGRG RAEAVERIAP LLTQIANPVE
QAHYIQQLAR LIDIEEAHIL AALSNKARQE GQRRPSDQGR ATKVLEQQPG DANQQPDETP
PPPTQEEYLL SWIIRYPTAR AAVEEKLHRD LATYPALQSL MSGTIDELFT SDECRALWRA
WIAAPTGSDP QAWATTLYAP LDAVAQRVLE LHAPQPQAYR IVNDALECAT ILQRDAAKRW
LVQIARMQTA ATGEAEQEIL LDQLVQVKQF INMLSIPRRS SAYADLHVLH MP
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